hsa -------GUUCCACUCUAGCAGCACGUAAAUAUUGG-CGUAGUGAAAUAUAUAUUAAACACCAAUAUUAC-UGUGCUGCUUUAGUGUGAC------- miRbase UCSC ENSEMBL 3:160122533-160122613(+)        -30.8        ((..((((..(((((((((..((((((((.((..(((........))).)).))))))))..)))))))))..))))..))       
ptr --------UUCCACUCUAGCAGCACGUAAAUAUUGG-CGUAGUGAAAUAUAUGUUAAACACCAAUAUUAC-UGUGCUGCUUUAGUGUGAC------- miRbase UCSC ENSEMBL 3:165480748-165480827(+)        -29.8        .((((((..(((((((((..((((((((.((..(((........))).)).))))))))..)))))))))..)))).)).        
ggo -------------------------------------------------------------------------------------------------                      
ppy -------GUUCCACUCUAGCAGCACGUAAAUAUUGGGCGUAGUGAAAUAUAUAUUAAACACCAAUAUUAC-UGUGCUGCUUUAGUGUGAC------- miRbase UCSC ENSEMBL 3:163674255-163674336(+)        -31.3       ((..((((..(((((((((..((((((((...(((((.......)))))....))))))))..)))))))))..))))..))       
mml -------GUUCCACUCUAGCAGCACGUAAAUAUUGG-CGUAGUGAAAUAUGUAUUAAACACCAAUAUUAC-UGUGCUGCUUCAGUGUGAC------- miRbase UCSC ENSEMBL 2:127281064-127281144(-)        -30.5        ((..((((..(((((((((..((((((((.((..(((........))).)).))))))))..)))))))))..))))..))       
cja -------------------------------------------------------------------------------------------------                      
tsy -------------------------------------------------------------------------------------------------                      
mmr -------------------------------------------------------------------------------------------------                      
oga -------------------------------------------------------------------------------------------------                      
tbe -------------------------------------------------------------------------------------------------                      
cpo -------------------------------------------------------------------------------------------------                      
dor -------------------------------------------------------------------------------------------------                      
mmu CAUGCUUGUUCCACUCUAGCAGCACGUAAAUAUUGG-CGUAGUGAAAUAAAUAUUAAACACCAAUAUUAU-UGUGCUGCUUUAGUGUGACAGGGAUA miRbase UCSC ENSEMBL 3:68813824-68813918(+)          -38.6 .((.(((((..((((..(((((((((..((((((((.((..(((........))).)).))))))))..)))))))))..))))..))))).)).
rno -------GUUCCGCUCUAGCAGCACGUAAAUAUUGG-CGUAGUGAAAUAAAUAUUAAACACCAAUAUUAU-UGUGCUGCUUUAGUGUGAC-------         UCSC ENSEMBL 2:158992390-158992471(+)        -30.8        ((..((((..(((((((((..((((((((.((..(((........))).)).))))))))..)))))))))..))))..))       
str -------------------------------------------------------------------------------------------------                      
opr -------------------------------------------------------------------------------------------------                      
ocu -------------------------------------------------------------------------------------------------                      
bta -------------------------------------------------------------------------------------------------                      
ttr -------------------------------------------------------------------------------------------------                      
vpa -------------------------------------------------------------------------------------------------                      
ssc --------CAGUGCCUUAGCAGCACGUAAAUAUUGG-CGUUAAGAUUCUAAAAUU-AUCUCCAGUAUUAACUGUGCUGCUGAAGUAAGG-------- miRbase      ENSEMBL 11:17603121-17603199(+)         -27.9         ...(((.((((((((((((.((((((((.....((((.........)))))))))))).)).)))))))))).)))...        
cfa ----------------UAGCAGCACGUAAAUAUUGG-CGUAGUGAAAUAAAAAUUAAACACCAAUAUUAU-UGUGCUGCUUUA-------------- miRbase UCSC ENSEMBL 34:29470053-29470117(+)         -23.1                .(((((((((..((((((((.((..(((........))).)).))))))))..)))))))))...               
fca -------GUUCCGCUCUAGCAGCACGUAAAUAUUGG-CGUAGUGAAAUAAGUAUUAAACACCAAUAUUAU-UGUGCUGCUUUAGCGUGAC-------              ENSEMBL scaffold_171652:32815-32896(+)  -32.7        ((..((((..(((((((((..((((((((.((..(((........))).)).))))))))..)))))))))..))))..))       
eca ----------------UAGCAGCACGUAAAUAUUGG-CGUUAAGAUUCUAAAAUU-AUCUCCAGUAUUAACUGUGCUGCUG---------------- miRbase UCSC ENSEMBL 17:21138923-21138985(+)         -23.2                 (((((((((((.((((((((.....((((.........)))))))))))).)).)))))))))                
mlu -------------------------------------------------------------------------------------------------                      
pva -------------------------------------------------------------------------------------------------                      
eeu -------------------------------------------------------------------------------------------------                      
sar -------------------------------------------------------------------------------------------------                      
cho -------------------------------------------------------------------------------------------------                      
ete -------GUUCCGCUCUAGCAGCACGUAAAUAUUGG-CGUAGUGGAAUAAAUAUUAAACACCAAUAUUAU-UGUGCUGCUUUAGUGUGAC-------              ENSEMBL GeneScaffold_590:83937-84018(+) -31.1        ((..((((..(((((((((..((((((((.((((((.......))))..)).))))))))..)))))))))..))))..))       
laf -------------------------------------------------------------------------------------------------                      
pca -------------------------------------------------------------------------------------------------                      
meu -------------------------------------------------------------------------------------------------                      
mdo -------------------------------------------------------------------------------------------------                      
oan -------------------------------------------------------------------------------------------------                      
gga CCUACUUGUUCCGCCCUAGCAGCACGUAAAUAUUGG-UGUAGUAAAAUAAACCUUAAACCCCAAUAUUAU-UGUGCUGCUUAAGCGUGGCAGAGAU- miRbase UCSC ENSEMBL 9:23742791-23742884(-)          -32.8 .....((((..(((...(((((((((..((((((((.((..(((........))).)).))))))))..)))))))))...)))..)))).... 
mga -------------------------------------------------------------------------------------------------                      
tgu -------------------------------------------------------------------------------------------------                      
aca ----CUUGUUCCGCCCUAGCAGCACGUAAAUAUUGG-UGUAGUAAAGAUAAUCUUAA-CCCCAAUAUUGU-UGUGCUGCUUAAGCGUGGCAGGGAU-         UCSC ENSEMBL scaffold_6:9500385-9500474(+)   -37.1    (((((..(((...(((((((((..((((((((....((.(((.....))).)).))))))))..)))))))))...)))..)))))...   
xtr -------------------------------------------------------------------------------------------------                      
dre --------CCUCGCUUUAGCAGCACGUAAAUAUUGG-UGU-GUUAUAGUCAAGGCCAACCCCAAUAUUAUGUGUGCUGCUUCAGUAAGG--------         UCSC ENSEMBL 15:1612499-1612578(+)           -29.8         (((..((..(((((((((((((((((((.((......((....))..)).)))))))).)))))))))))..))..)))        
gac -------------------------------------------------------------------------------------------------                      
ola ------------GCUGUAGCAGCACGUAAAUAUUGG-CGU-GUGAAAAAAGCCCCCAACCCCAAUAUUAGCAGUGCUGCUUCAGU------------         UCSC ENSEMBL 13:12901190-12901261(+)         -28.69             ((((.((((((((((.((((((((.((................)).)))))))).)).)))))))).))))            
tru -------------------------------------------------------------------------------------------------                      
tni -------------------------------------------------------------------------------------------------                      
cin -------------------------------------------------------------------------------------------------                      
csa -------------------------------------------------------------------------------------------------                      
dme -------------------------------------------------------------------------------------------------                      
cel -------------------------------------------------------------------------------------------------                      
                    ********************  **                * * *** ****    ********                 
                    ********************  **    *           * * *** *****  *********  *              
                 *  ********************  ** ** *        ** * * *********  ********** **             
                 *  ******************** *** ******   *  ** *** *********  ********** **   *         
               * *  ******************** ********** * *  ****** *********  ********** **   *         
            **** *********************** ************** ******* *********  ********** ****** *       
           ***** *********************** ********************************  ********** ****** *       
           ***************************** ********************************* *******************       
           ***************************** ********************************* *******************       
           ***************************** ********************************* *******************       
           ***************************** ********************************* *******************       
           ***************************** ********************************* *******************       
        ******************************** ******************************************************* *** 
    * * ******************************** *********************************************************** 
    *************************************************************************************************