hsa --------GCUGGGAUGUGUCAGGUAGGCAGUGUAUUGCUAGC-GGCUGUUAA-----UGAUUUUAACAGUUGCUAGUUGCACUCCUCUCUGUUGCAUUCAGAAGC------------------ miRbase UCSC ENSEMBL 5:54468090-54468181(-)             -46.4             (((.(((((((.(((..(((.((((((..(((((((((((((((.....))))))))))))))))))))))))..))).)))))))...)))             
ptr ----------------------------------------------------------------------------------------------------------------------------                      
ggo ----------------------------------------------------------------------------------------------------------------------------                      
ppy ----------------------------------------------------------------------------------------------------------------------------                      
mml ----------------------------------------------------------------------------------------------------------------------------                      
cja ----------------------------------------------------------------------------------------------------------------------------                      
tsy ----------------------------------------------------------------------------------------------------------------------------                      
mmr ----------------------------------------------------------------------------------------------------------------------------                      
oga ----------------------------------------------------------------------------------------------------------------------------                      
tbe ------AAGCUUGGAUGUGUCAGGUUGGCAGUGCAAUGCUAGCUGGCUGUUGU-AAUUCCAUUUUAACAGUUGCUAGUUACACUGCCCUCUGUUGCAUUCA-----------------------              ENSEMBL GeneScaffold_1027:101720-101814(-) -38.6            .....((((((((.((((..(((((((....((((((.((((((((...........))))))))))))))..))))))).)))).))))))))            
cpo ----------------------------------------------------------------------------------------------------------------------------                      
dor ----------------------------------------------------------------------------------------------------------------------------                      
mmu AGGAUGAAGUGUGGGUGUGUCAGGCAGGCAGUGCAUUGCUAGCUGGCUGUUAG-AACUUUAUCCCAACAGUUGCUAGCUGCACUACCCUCUGCUGCACUCAGAAGCAUGC-------------- miRbase UCSC ENSEMBL 13:113826191-113826299(+)          -41.0     ........((.((((((((.((((..((.((((((..((((((.(((((((.((......))..))))))))))))))))))).)).)))).))))))))...))....    
rno ------AAGCGUGGGUGUGUCAGACAGGCAGUGCAUUGCUAGCUGGCUGUUAG-AACUUCGUCCCAACAGUGGCUAGCUGCACUACCCUCUGCUGCACUUAGAAGC------------------ miRbase UCSC ENSEMBL 2:44416738-44416836(+)             -39.6          ..((.((((((((.((((..((.((((((..((((((((.(((((.((......))..))))))))))))))))))).)).)))).))))))))...))         
str ----------------------------------------------------------------------------------------------------------------------------                      
opr ----------------------------------------------------------------------------------------------------------------------------                      
ocu ----------------------------------------------------------------------------------------------------------------------------                      
bta ---AUGAAGCUUGAAUGUGUCAGGUAGGCAGUGCAUCUCUAGCUGGCUGUUAA-AAUUUCUUUUUAACAGUUGCUAGUUGCACUCCCCUCUGUUGCAUUCAUAAUCUUGC-------------- miRbase UCSC ENSEMBL 20:25595834-25595939(+)            -42.5      ...(((..((((((((.((((..((.((((((...(((((.(((((((((((.....)))))))))))))))).))))))))..)))).))))))))....)))..      
ttr ----------------------------------------------------------------------------------------------------------------------------                      
vpa ---------------UGUGUCAGAUAGGCAGUGCAUCGCUAGCUGGCUGUUAC-AAUUUCAUUUUAACAGUUGCUAGUUGCACUCCUCUC----------------------------------              ENSEMBL GeneScaffold_2421:95171-95245(-)   -27.7                      .......((.(((.((((((..((((((.((((((((.(((...))).))))))))))))))))))))))).))                      
ssc ----------------------------------------------------------------------------------------------------------------------------                      
cfa ----------------------------------------------------------------------------------------------------------------------------                      
fca ----------------------------------------------------------------------------------------------------------------------------                      
eca ----------------------------------------------------------------------------------------------------------------------------                      
mlu ----------------------------------------------------------------------------------------------------------------------------                      
pva ------------GGAUGUGUCAGGUAGGCAGUACAUUGCUAGCUGGCUGUUA------UAAUUUCAACAGUGGCUAGUUGUGCUCCCCUCUGUUGCAUUCA-----------------------              ENSEMBL GeneScaffold_3724:77471-77554(-)   -34.8                  (((((((.((((..((.((((((..((((((((.(((((........)))))))))))))))))))))..)))).))))))).                 
eeu ---------------UGUGUCAGGGAGGCAGUGCAUUACUAGCUGGCUGUUAU-CGUGUCAUUUUAACAGCUGCUAGUUGCACUCCC-------------------------------------              ENSEMBL GeneScaffold_4818:78668-78739(-)   -28.4                        .......((((....(((((..((((((.((((((((...........)))))))))))))))))))))))                       
sar ----------------------------------------------------------------------------------------------------------------------------                      
cho ----------------------------------------------------------------------------------------------------------------------------                      
ete ----------------------------------------------------------------------------------------------------------------------------                      
laf ----------------------------------------------------------------------------------------------------------------------------                      
pca ----------------------------------------------------------------------------------------------------------------------------                      
meu ----------------------------------------------------------------------------------------------------------------------------                      
mdo ----------------------------------------------------------------------------------------------------------------------------                      
oan ----UCCAUUAAGAAUGUGCCGGUUUGGCAGUGCUUUGCUAGCUGGCUGUU---CAAUAAAUGAUUCCAGCAGCUGGUUGCACGCCCCACUGUCACAAUCCAAACCCAACGCGAAAGGAAUGGA miRbase UCSC ENSEMBL Contig3432:4405-4521(+)            -43.0 ((((((..((.((((.((((..(((.((((...((((((((.(((.(((.....)))...))))))))))).)))))))..)))).)))).)).....((.........))))))))
gga -------------------GUGGUCUGGCAGUGCGU-GUUAGCUGGCUGUUGUCCCA-AGGUACCAACAGCUGCUCACGGCACUCCAGACUGC------------------------------- miRbase UCSC ENSEMBL Z:16041927-16041998(-)             -38.6                       (((((((((.(((((.(((.(((.((((((((.((...))...))))))))))).)))))))))))))))))                       
mga ----------------------------------------------------------------------------------------------------------------------------                      
tgu ------------------AACAGUCUGGCAGUGCAU-GUUAGCUGGCUGUUGUCCCUUAUGUGUCCACAGCUGCUAUCUGCACUCCAUAUUGUU------------------------------              ENSEMBL Z:47246168-47246243(-)             -27.29                      ((((((.(((.((((((...((((.((((((................))))))))))..))))))))).))))))                     
aca ----------------------------------------------------------------------------------------------------------------------------                      
xtr ----------------------------------------------------------------------------------------------------------------------------                      
dre ----------------------------------------------------------------------------------------------------------------------------                      
gac ----------------------------------------------------------------------------------------------------------------------------                      
ola ----------------------------------------------------------------------------------------------------------------------------                      
tru ----------------------------------------------------------------------------------------------------------------------------                      
tni ----------------------------------------------------------------------------------------------------------------------------                      
cin ----------------------------------------------------------------------------------------------------------------------------                      
csa ----------------------------------------------------------------------------------------------------------------------------                      
dme ----------------------------------------------------------------------------------------------------------------------------                      
cel ----------------------------------------------------------------------------------------------------------------------------                      
                          *   ******       **** *******          *     ***  ***       *  *                                      
                        * *   ******** *   ************          *    ****  ***   ****** *                                      
                   **** ***   ********** **************          *   *****  ***** ****** *   ***                                
                   ********   ********** **************          *   ***** ****** ******** * ***                                
                *  ********  ***************************     ** ** * *************************** * ** *                         
                *  *************************************   * ** ************************************* ***                       
           **   ****************************************  ******************************************* *** ** *                  
          **** ****************************************** *********************************************** ** *                  
        * *********************************************** ****************************************************   *              
       ******************************************************************************************************* ***              
    ****************************************************************************************************************************