hsa --------------CGGGGUUGGUUGUUAUCUUUGGUUAUCUAGCUGUAUGAGUGGUGUGGAGUCUUCAUAAAGCUAGAUAACCGAAAGUAAAAAUAACCCCA--------------------- miRbase UCSC ENSEMBL 1:156390133-156390221(-)     -42.0                 .(((((((....(((..(((((((((((((((.((((((.((.......)))))))).)))))))))))))))..)))...))))))).                 
ptr --------------CGGGGUUGGUUGUUAUCUUUGGUUAUCUAGCUGUAUGAGUGGUGUGGAGUCUUCAUAAAGCUAGAUAACCGAAAGUAAAAAUAACCCC---------------------- miRbase UCSC ENSEMBL 1:135630733-135630820(-)     -40.3                  .(((((((....(((..(((((((((((((((.((((((.((.......)))))))).)))))))))))))))..)))...)))))))                 
ggo ----------------------------------------------------------------------------------------------------------------------------                      
ppy --------------CGGGGUUGGUUGUUAUCUUUGGUUAUCUAGCUGUAUGAGUGGUGUGGAGUCUUCAUAAAGCUAGAUAACCGAAAGUAAAAAUAACCCCA--------------------- miRbase UCSC ENSEMBL 1:95096290-95096378(+)       -42.0                 .(((((((....(((..(((((((((((((((.((((((.((.......)))))))).)))))))))))))))..)))...))))))).                 
mml --------------CGGGGUUGGUUGUUAUCUUUGGUUAUCUAGCUGUAUGAGUGGUGUGGAGUCUUCAUAAAGCUAGAUAACCGAAAGUAAAAAUAACCCCA--------------------- miRbase UCSC ENSEMBL 1:135024723-135024811(-)     -42.0                 .(((((((....(((..(((((((((((((((.((((((.((.......)))))))).)))))))))))))))..)))...))))))).                 
cja ----------------------------------------------------------------------------------------------------------------------------                      
tsy ----------------------------------------------------------------------------------------------------------------------------                      
mmr ----------------------------------------------------------------------------------------------------------------------------                      
oga ----------------------------------------------------------------------------------------------------------------------------                      
tbe ----------------------------------------------------------------------------------------------------------------------------                      
cpo ----------------------------------------------------------------------------------------------------------------------------                      
dor ----------------------------------------------------------------------------------------------------------------------------                      
mmu --------------CGGGGUUGGUUGUUAUCUUUGGUUAUCUAGCUGUAUGAGUGGUGUGGAGUCUUCAUAAAGCUAGAUAACCGAAAGUAAAAAUAACCCCA--------------------- miRbase UCSC ENSEMBL 3:88019520-88019608(+)       -42.0                 .(((((((....(((..(((((((((((((((.((((((.((.......)))))))).)))))))))))))))..)))...))))))).                 
rno --------------CGGGGUUGGUUGUUAUCUUUGGUUAUCUAGCUGUAUGAGUGGUGUGGAGUCUUCAUAAAGCUAGAUAACCGAAAGUAAAAAUAACCCCA--------------------- miRbase UCSC ENSEMBL 2:180293009-180293097(+)     -42.0                 .(((((((....(((..(((((((((((((((.((((((.((.......)))))))).)))))))))))))))..)))...))))))).                 
str ----------------------------------------------------------------------------------------------------------------------------                      
opr ----------------------------------------------------------------------------------------------------------------------------                      
ocu ----------------------------------------------------------------------------------------------------------------------------                      
bta --------------GGAGGCCCGUUUCUCUCUUUGGUUAUCUAGCUGUAUGAGUGCCACAGAGCCGUCAUAAAGCUAGAUAACCGAAAGUAGAAAUGACUCUCA-------------------- miRbase UCSC ENSEMBL 21:20602252-20602341(+)      -41.1                 .((((..(((((((((.(((((((((((((((.(((((..((......))..))))).))))))))))))))))).)))))))..)))).                
ttr ----------------------------------------------------------------------------------------------------------------------------                      
vpa ----------------------------------------------------------------------------------------------------------------------------                      
ssc --------------CGGGGUUGGUUGUUAUCUUUGGUUAUCUAGCUGUAUGAGUGGUGUGGAGUCUUCAUAAAGCUAGAUAACCGAAAGUAAAAAUAACCCCA--------------------- miRbase      ENSEMBL 4:97531326-97531414(+)       -42.0                 .(((((((....(((..(((((((((((((((.((((((.((.......)))))))).)))))))))))))))..)))...))))))).                 
cfa -----------------------------UCUUUGGUUAUCUAGCUGUAUGAGUGGUGUGGAGUCUUCAUAAAGCUAGAUAACCGAAAGUA--------------------------------- miRbase UCSC ENSEMBL 7:44477956-44478017(+)       -26.3                               ..(((((((((((((((.((((((.((.......)))))))).)))))))))))))))....                              
fca ----------------------------------------------------------------------------------------------------------------------------                      
eca ----------------------------------------------------------------------------------------------------------------------------                      
mlu ----------------------------------------------------------------------------------------------------------------------------                      
pva ----------------------------------------------------------------------------------------------------------------------------                      
eeu ----------------------------------------------------------------------------------------------------------------------------                      
sar ----------------------------------------------------------------------------------------------------------------------------                      
cho ----------------------------------------------------------------------------------------------------------------------------                      
ete ----------------------------------------------------------------------------------------------------------------------------                      
laf ----------------------------------------------------------------------------------------------------------------------------                      
pca ----------------------------------------------------------------------------------------------------------------------------                      
meu ----------------------------------------------------------------------------------------------------------------------------                      
mdo --------------CGAGGCCCGUUUCUCUCUUUGGUUAUCUAGCUGUAUGAGUGUUAUUGAGCUAUCAUAAAGCUAGAUAACCGAAAGUAGAAAUGACUUUCA-------------------- miRbase UCSC ENSEMBL 1:122711570-122711659(-)     -38.2                 .((((..(((((((((.(((((((((((((((.(((((..(((....)))..))))).))))))))))))))))).)))))))..)))).                
oan GGGGCCGGAUCGCACUGAGCUGGCUUUGGUCUUUGGUUAUCUAGCUGUAUGAGUG-UAUGUGAU-GUCAUAAAGCUAGAGAACCGAAUGUAAAAACCAGCUUCCGCCGUCACAGCCCCGGCCCC miRbase UCSC ENSEMBL Contig6292:18831-18952(-)    -51.8 ((((((((...((...(((((((.(((....(((((((.(((((((.(((((.(((.....)))))))).))))))).)))))))....))).)))))))..)).((....)).))))))))
gga --------------UUGGGUUGGUUUUUCUCUUUGGUUAUCUAGCUGUAUGAGUG-UAUGUGAU-AUCAUAAAGCUAGAGAACCGAAUGUAAAAACCCGCUCGC-------------------- miRbase UCSC ENSEMBL 28:2709362-2709449(+)        -34.0                  ..((((.(((((((...(((((((.(((((((.(((((.(((.....)))))))).))))))).)))))))...))))))).))))..                 
mga ----------------------------------------------------------------------------------------------------------------------------                      
tgu -------------------GAUGUUUCUGUCUUUGGUUAUCUAGCUGUAUGAGUGUUGUGGAGCCAUCAUAAAGCUAGAUAACCGAAAGUAG-------------------------------- miRbase      ENSEMBL 10:12969737-12969809(-)      -30.4                         .......(((..(((((((((((((((.(((((..(((....)))..))))).)))))))))))))))..)))                         
aca ----------------------------------------------------------------------------------------------------------------------------                      
xtr ----------------------------------------------------------------------------------------------------------------------------                      
dre ---------------GGGGUUGGCUGUUAUCUUUGGUUAUCUAGCUGUAUGAGUGUUAUUCAUUCUUCAUAAAGCUAGAUAACCGAAAGUAACAAGAAUCCC---------------------- miRbase UCSC ENSEMBL 16:27918568-27918654(+)      -39.2                  ((((((...(((((..(((((((((((((((.((((((((.....)))...))))).)))))))))))))))..)))))..))))))                  
gac ----------------------------------------------------------------------------------------------------------------------------                      
ola ----------------------------------------------------------------------------------------------------------------------------                      
tru ----------------------------------------------------------------------------------------------------------------------------                      
tni -----------CAGAGGGGUUGUCUGUUAUCUUUGGUUAUCUAGCUGUAUGAGUGACGUACAAUCUUCAUAAAGCUAGAUAACCGAAAGUAACAAGAAUCCCAUUA------------------ miRbase UCSC ENSEMBL 21_random:1842676-1842770(+) -41.4              ....((((((...(((((..(((((((((((((((.((((((.((.......)))))))).)))))))))))))))..)))))..))))))....              
cin ----------------------------------------------------------------------------------------------------------------------------                      
csa ----------------------------------------------------------------------------------------------------------------------------                      
dme ----------------------------------------------------------------------------------------------------------------------------                      
cel ----------------------------------------------------------------------------------------------------------------------------                      
                                 **************************           ************* ******* ***                                 
                            *    **************************   *       ************* ******* ***                                 
                      *   * *  * ************************** * *  *    *************************  **                             
                     **   * *  * ************************** * *  * ** *************************  **  *                          
                   **** ***** ** ************************** * ******* *****************************  * *                        
                   ********** ** ************************** ***************************************  * ***                      
                  ***************************************** **********************************************                      
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