miRNAligner

The table shows conservation of experimentally confirmed human miRNA in many species. Conservation is determined by examining the region of species' genome that aligns to the human miRNA.

Click on any cell to see conservation for each miRNA (point the cursor to any cell to see summary information). Columns are sorted by the species' distance from human. Rows are sorted by the miRNA's conservation profile. To see the full table better, zoom out: pressing Ctr- (or Mac-) a few times.

Note: Initial loading of table might take a few moments (for best performance use Firefox).

For questions and comments, contact Adam Kiezun


Legend:

seed conserved (0-17nt difference in mature)
seed not conserved (0-17nt difference in mature)
miRNA absent
miRNA present in miRbase (v. 12)



Mammals










Placental Mammals













Primates

Rodents






















Fish













































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mir-218-2
mir-30c-1
let-7f-2
let-7a-1
mir-103-1
mir-103-2
mir-107
mir-199a-1
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mir-30a
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mir-101-2
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mir-296
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mir-188
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mir-515-1
mir-1202
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mir-933
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mir-513a-2
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mir-519a-2
mir-513a-1
mir-516a-2
mir-518c
mir-519b
mir-526b
mir-517c
mir-518b
mir-515-2
mir-516a-1
mir-516b-1
mir-518e
mir-519a-1
mir-520a
mir-520b
mir-520d
mir-520g
mir-522
mir-524
mir-525
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mir-512-1
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mir-548a-3
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mir-521-2
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mir-526a-1
mir-517b
mir-548c
mir-1322
mir-510
mir-720
mir-923
mir-936
mir-1237
mir-1227
mir-518a-2
mir-520c
mir-518d
mir-1324
mir-548d-2
mir-941-1
mir-941-3
mir-1238
mir-527
mir-1229
mir-629
mir-625
mir-518a-1
mir-941-2
Last update Jun 3, 2009