hsa-mir-499 GCCC--TGTCCCCTG-TGCC----------T----TGGGCGGGCGGCTGTTAAGACTTGCAGTGATGTTTAACTCCTCT-----CC-----ACGTGAA------------CATCACAGCAAGTCTGTGCTGCTTCCCGTCCCTACGCTGCCTGGG-----CAGGGT
hsa-mir-499 ((((--(((((....-.((.----------.----.(((((((.(((.((..((((((((.((((((((((........-----..-----...))))------------)))))).))))))))..)).))).)))).)))...)).....)))-----))))))
human ····--·········-····----------·----···············•••••••······················-----··-----·······------------·············································-----······ hsa-mir-499 [array-cloned, cloned]
chimp ····--·········-····----------·----·········A·····•••••••······················-----··-----·······------------·············································-----······ ptr-mir-499
gorilla ····--·········-····----------·----···············•••••••······················-----··-----·······------------·············································-----······
orangutan ····--·········-····----------·----············C··•••••••······················-----··-----·······------------········································T····-----······
rhesus ····--·······-·-··T·----------·----·········A·····•••••••······················-----··-----·······------------·············································-----······ mml-mir-499
marmoset ----------------------------------------------------------------------------------------------------------------------------------------------------------------------
tarsier ----------------------------------------------------------------------------------------------------------------------------------------------------------------------
bushbaby ····--···T···----------------------···············•••••••······················------·-----G······------------······G························TC·-·····T····-----····C·
mouseLemur ····--·······----------------------···············•••••••······················-----··-----·······------------·······························TC·-··········-----······
treeShrew ····--·········-····----------C----G··············•••••••······················-----··-----·······------------······················C·········C·T···A······-----·····C
guineaPig ·--·TGCA·······-G···----------C----···············•••••••···············T······-----··-----·······------------································C·T·······A··-----·····C
kangarooRat ·--·--CA·A·T--·-CA··----------C----·····A··A···G··•••••••·················G····-----··ACGTG·······------------······················C···T·····C··A····TG···-----·····C
mouse ·--·--C·····-··-··T·----------·----····T····A·····•••••••··············G·······-----G·-----·T·····------------·······················G··T·C···C·T··········-----T····C mmu-mir-499 [MPSS]
rat ·--·--C·····----··T·----------·----····T····A·····•••••••··············G·······-----··-----·T·····------------·······················G··T·C···C·T··········-----T····C rno-mir-499 [cloned]
squirrel ----------------------------------------------------------------------------------------------------------------------------------------------------------------------
pika ·G··--·········-CA··----------C----···············•••••••···············T····G·-----··-----G······------------······················C·········C·T··C··----------TG···C
rabbit ·G··--CA·······-C···----------C----·········A··C··•••••••···············T······-----··-----·······------------·····························T··C····C·-----------TCT··C
alpaca ··TG--·········-CA··----------C----············C··•••••••······················-----··-----·······------------································C············-----······
cow ··T·--·········-CA··----------C----G···········C··•••••••······················-----··-----·······------------································C············-----······ bta-mir-499 [cloned]
dolphin ··T·--·········-CA··----------C----············C··•••••••···············T······-----··-----·······------------································C·T··········-----······
cat ··T·--·········-CA··----------C----···············•••••••······················-----·T------T·····------------·······························GC············-----······
dog ··T·--······T··-CA··----------C----············C··•••••••······················-----··-----·······------------································C············-----·····A cfa-mir-499 [Solexa]
horse ·TT·--·········-CA··----------C----···············•••••••······················-----··-----·······------------································C·T··········-----······
megabat A·T·--·········-CA··----------C----············C··•••••••······················-----··-----·······------------································C············-----······
microbat ·AT·--·········-CA··----------C----············C··•••••••······················-----··-----·······------------··························T·····CGA··········-----······
hedgehog ····--··--·····-ca··----------C----·········A·····•••••••······················-----··-----·······------------································CT·A·········-----······
shrew ··T·--··--·G··C-C··A----------C----C·······T···C··•••••••·····················------A·-----·······------------·······················G··T····TCTT··········-----······
armadillo ··T·--·········-C···----------C----········T···C··•••••••······················-----G·-----·T·····------------······················C····················A·-----·····C
sloth ----------------------------------------------------------------------------------------------------------------------------------------------------------------------
elephant ··T·--·········-CA··----------C----·········A··C··•••••••······················-----··-----·······------------································C············-----·····C
rockHyrax ··T·--···A·····-CA··----------C----·········A··C··•••••••······················-----··-----·······------------································C············-----·····C
tenrec ----------------------------------------------------------------------------------------------------------------------------------------------------------------------
opossum AG·T--G········CCT··----------C----C········A·····•••••••···············T··T···-----·T-----·T·····------------·······A·······A·A·A·T······G·T·C·TA·CT·TG··A-----·CA··C
platypus ·G··--C·G····-·-CT··----------CGCAAC··TG···A··G·C·•CTA••C·C···A·C··CAGG·---··T·-----GA-----G··A···GACAATCTGTCT·CC·C··AAG····---··CTTC··AT··A-----·T·····A··CCTCT·TA···
chicken ----------------------------------------------------------------------------------------------------------------------------------------------------------------------
zebraFinch ----------------------------------------------------------------------------------------------------------------------------------------------------------------------
lizard ----------------------------------------------------------------------------------------------------------------------------------------------------------------------
frog ----------------------------------------------------------------------------------------------------------------------------------------------------------------------
fugu ----------------------------------------------------------------------------------------------------------------------------------------------------------------------
tetraodon ----------------------------------------------------------------------------------------------------------------------------------------------------------------------
medaka ----------------------------------------------------------------------------------------------------------------------------------------------------------------------
stickleback ----------------------------------------------------------------------------------------------------------------------------------------------------------------------
zebrafish --------------------CTGTCCAATAC----··A·A···A···A··•••••••··············GAG-----AAATGT·-----··A····------------······TTT············GC···T··T·TG·GT··A·AAA------------- dre-mir-499 [cloned]
lamprey ----------------------------------------------------------------------------------------------------------------------------------------------------------------------
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