hsa -------------------------CUGGCUG-AGGUGGGAUCCCGAGG----CCUCUCCAGUCCCCUGAGGG----UGCACCACUGGCCCAUCUCACCCAGG---------- UCSC ENSEMBL 16:47538724-47538793(+) ptr ------GGUGAAGGCUGGUGUGCUCACUGGCUGAGGUGGGAUCCCGAGG----CCUCUCCAGUCUGCCGACAG----CGUACCA----------------------------- UCSC ENSEMBL Un:651638-651708(-) ggo ------------------------------CCGAGGUGGGAUCCCGAGG----CCUCUCCGGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL scaffold_239719:297-370(+) ppy -------------------------CUGGCUG-AGGUGGGAUCCCGAGG----CCUCUCCAGUCCCCUGAGGG----CGCACCACUGGCCCAUCUCACCCAGG---------- UCSC ENSEMBL 16:34405623-34405692(+) mml ----------------------------------------------------------------------------------------------------------------- cja ----------------------------------------------------------------------------------------------------------------- tsy ---------------------CCCGCCGGCCG-AGGUGGGAUCCCGAGGCCGCCCCCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL scaffold_217615:147-232(+) mmr ----------------------------------------------------------------------------------------------------------------- oga -------------------CCCUCGCCGGCC-GAGGUGGGAUCCCGAGG----CCUCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGGGA ENSEMBL scaffold_66550:3734-3819(+) tbe -------------------------CCGGCCGGAGGUGGGAUCCCGAGG----CCUCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL scaffold_100944:4196-4274(-) cpo ---------------CCCCGCCUCGCCGGCCCGAGGUGGGAUCCCGAGG----CCUCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGGGA UCSC ENSEMBL scaffold_927:5162-5252(-) dor ---------------------CCCGCCGGCCG-AGGUGGGAUCCCGAGG----CCUCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL GeneScaffold_6815:1415547-1415628(-) mmu -----------GAAGAGCCCGGCCCGGGGCCCGAGGUGGGAUCCCGAGG----CCUCUCCAGUCCGCCGAGGGAGGGCGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- miRbase UCSC ENSEMBL 3:37380281-37380376(+) rno -AAGGUGAAGGGCGCCAUCUGGGGGCC----CGAGGUGGGAUCUCAAGG----CCUCUCCAGUCCUCCACCGG----AGGA-------------------------------- UCSC ENSEMBL 4:42662514-42662582(-) str ---------------------CCCGCCGGCCG-AGGUGGGAUCCCGAGG----CCUCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL scaffold_43919:450-531(-) opr ---------------------CCCGCCGGCCG-AGGUGGGAUCCCGAGG----CCUCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL scaffold_8304:25682-25763(+) ocu ---------------CCCGCCGUCGUCGGCCG-AGGUGGGAUCCCGAGG----CCCUUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL GeneScaffold_1357:131572-131659(+) bta ----------------------------------------------------------------------------------------------------------------- ttr ---------------------GCCGGCGGCCG-AGGUGGGAUCCCGAGG----CCUCUCCAGUCCGCCGAGAG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCG---- ENSEMBL scaffold_116300:51423-51502(+) vpa ----------------------------------------------------------------------------------------------------------------- ssc ----------------------------------------------------------------------------------------------------------------- cfa ----------------------------------------------------------------------------------------------------------------- fca ----------------------------------------------------------------------------------------------------------------- eca ----------------------------------------------------------------------------------------------------------------- mlu ----------------------------------------------------------------------------------------------------------------- pva ----------------------------------------------------------------------------------------------------------------- eeu ---------GAAGGCCGGC-UCCGCCUUGGCUGAGGUGGGAUCCCGAGG----CCUCUCCAGUCCGCCGAGUG----CGAACCACCUUC------------------------ ENSEMBL scaffold_17201:29-100(+) sar GGUUGUGUAAGGGGCGGGUUGGCGGCCAGGCCGAGGUGGGAUCCCGAGG----CCUCUCCAGUCUGCCGAGGG----CGUACC------------------------------ ENSEMBL scaffold_212354:4561-4636(+) cho -----------------CCCCAUCGCCGGCC-GAGGUGGGAUCCCGAGG----CCUCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGGGA ENSEMBL scaffold_219019:1912-1999(+) dno -----------------------CGCCGGCC-GAGGUGAGAUCCCGAGG----CCUCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL scaffold_169253:6914-6993(+) ete ----------------------------------------------------------------------------------------------------------------- laf ----------------------------------------------------------------------------------------------------------------- pca ---------------GCCUCGCUCGCCGGCCG-AGGUGGGAUCCCGAGG----CCUCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGGGA ENSEMBL scaffold_4297:1432-1521(+) meu ----------------------------------------------------------------------------------------------------------------- mdo ----------------------------------------------------------------------------------------------------------------- oan ----------------------------------------------------------------------------------------------------------------- ***** **** * *** ** *** *** * * * * **************** ** ******** * ** * * *** * **************** ************ ***** * ** **** * * **************** ******************** ** ***** * * * **************** ******************** ******** ***** **** *** ****** **************** ******************** ************** **** *** ****** **************** ******************** ******************************** ******* **************** ******************** ********************************** ******** **************** ******************** ********************************** ******** ***************** ******************** ********************************** ************************** ******************** ********************************** *************************** ******************** ********************************** **************************** ******************** ********************************** **************************** ******************** ********************************** **************************** ******************** ********************************** *** **************************** ******************** ********************************** ************************************ ******************** ************************************ * * ************************************** ******************** ************************************ *** ***************************************** ******************** ************************************ *****************************************************************************************************************