hsa -----------------CUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGC------------ miRbase UCSC ENSEMBL X:65238712-65238821(+) ptr -------CCUGGCCUC-CUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGCUUACCAG----- miRbase UCSC ENSEMBL X:65229619-65229728(+) ggo -------CCUGGCCUC-CUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGCUUACCAG----- miRbase ppy -------CCUGGCCUC-CUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUAGACACUCCGUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGCUUACCAG----- miRbase mml ----------GGCCUC-CUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCGUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCAUAUGCUUACCAG----- miRbase UCSC ENSEMBL X:64563509-64563618(+) cja -------CCUGGCCUC-CUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUAGACACUCCGUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGUGACACAUGCUUA--------- ENSEMBL Contig615:578273-578379(+) tsy -------CCUGGUCUC-CUGCAGUGCCACACUCC-GUGUAUUUGACAAGCUGAGUGGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCAUAUGC------------ ENSEMBL GeneScaffold_5208:38296-38399(+) mmr -----------GCCUC-CUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCGUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGC------------ ENSEMBL scaffold_5858:31606-31705(+) oga -----------------CUGCAGUGCCACACUCU-GUGUAUUUGACAGGCUGAGUGGAACACUCAGUUUAAUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUG---------------------- ENSEMBL scaffold_17181:44076-44160(+) tbe --------CUGGCCUC-CUGCAGUGCUUCACUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACCUGCUUA--------- ENSEMBL GeneScaffold_4687:166021-166126(+) cpo ------------------UGCAGUACCACACUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGC------------ UCSC ENSEMBL scaffold_122:2726051-2726144(+) dor --------CUGGCUUC-CAGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACCUGCCUAGCA------ ENSEMBL GeneScaffold_4193:59528-59636(+) mmu -----------------CUGCAGUGUCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCUGUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGUGGCUCAUGC------------ miRbase UCSC ENSEMBL X:93438156-93438265(+) rno --------CUGGCCUU-CUGCAGUGUUACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCUGUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGUGGCUCAUGCUUA--------- miRbase UCSC ENSEMBL X:83869053-83869162(+) str -------CCUGGCCUC-CAGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCGUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCC-AAGUGCGGCACAUGCUUA--------- ENSEMBL GeneScaffold_3572:36168-36273(+) opr ------------------------------------------------------------------------------------------------------------------------------ ocu ------------------------------------------------------------------------------------------------------------------------------ bta -----------GCCUC-CUGCAGUGCCAUGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUAGUA-G--UGUCAGUUUG-UCAAAUACCCCAAGUGUGGCAUAUGC------------ miRbase UCSC ENSEMBL X:56723506-56723613(-) ttr -----------GCCUC-CUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUAGACACUCCAUGUAGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCAUAUGC------------ ENSEMBL scaffold_96670:13286-13385(+) vpa -----------GCCUC-CUGCAGUGCCACACUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUAGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCAUAUGC------------ ENSEMBL scaffold_5225:9168-9267(+) ssc ---------------C-CUGCAAUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUAGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCAUAUGC------------ ENSEMBL X:51247491-51247586(-) cfa -------CCUGGCCUC-CUGCAGUGCCACACUCC-GUGUAUUUGACAAGCUGAGUUAGACACUCCAUGUGGAA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGC------------ miRbase UCSC ENSEMBL X:53762315-53762417(+) fca ------------------------------------------------------------------------------------------------------------------------------ eca -----------GCCUC-CUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGC------------ miRbase UCSC ENSEMBL X:48492588-48492691(+) mlu ----------GGCCUC-CUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCAUGUG------------- ENSEMBL GeneScaffold_3652:28397-28496(+) pva -------CCUGGCCUC-CUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGC------------ ENSEMBL GeneScaffold_2372:67467-67570(+) eeu ------------CCUC-UUGCAAUGUCACGCUCC-GUGUAUUUGACAAGCUGAGUUAGACACUCCAUAUGGAA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCAUAUGCU----------- ENSEMBL scaffold_364297:5396-5495(+) sar --------------------CAGUGUCACACUCC-GCGUAUUUGACAAGCUGAAUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUG---------------------- ENSEMBL scaffold_196592:11823-11904(+) cho ------------------------------------------------------------------------------------------------------------------------------ dno ----------GGCCUC-CUGCAGUGCCACGCUCCCGUGUAUUUGACAAGCUGAGUUGGACACUCCAUAUGGUA-GAGUGUCAGUUUGGUCAAAUACCCCAAGUGCGGCACAUGC------------ ENSEMBL scaffold_45361:14104-14206(+) ete -------------CUC-CUGCAGUGCCACGCUCC-GUGUAUUUGAUAAACUGAAUUAGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCUCAUGC------------ ENSEMBL scaffold_304610:43393-43490(+) laf -------CCUGGCCUC-CUGCAGUGUCACGCUCC-GUGUAUUUGAUAAGCUGAGUUGGACACUUCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGC------------ ENSEMBL GeneScaffold_4237:4440-4543(+) pca -------CCUGGCCUC-CUGCAGUGCUAUGCUAC-GUGUAUUUGAUAAGCUGAGUUGGACACUUCAUGUUGUA-CAGUGUCAGUUUG-UCAAAUACUCUAAGUACAGCACAUGC------------ ENSEMBL scaffold_53998:6932-7035(+) meu ---------------C-CUGCAGUGCCACACUCC-GUGUAUUUGACAAGCUGAGUCAGACACUCCGUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGAGACAUUU-------------- ENSEMBL Scaffold20791:36632-36725(-) mdo --------------UC-CUUCAGUGCCACACUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCGUGUCGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGAGGCA----------------- miRbase UCSC ENSEMBL X:10078238-10078348(-) oan GCGACCACGUGACCACACCGCAGUGCCGCGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCGUGUGGUUUGAGUGUCAGUUUG-UCAAAUACCCUAAGUGAGGCAUGCUCACCCAUGUUUGC miRbase UCSC ENSEMBL Contig3675:6073-6196(+) ** * ** * ******** * **** * ***** * * ********** ******** * **** ** ** **** ********** ******* * ****** * * * * ************* ********** ***** ****** ** **** ********** ********* ******* * * *** ************* ********** ***** * * ****** *** **** ********************* ******** *** *** ************* **************** * * ******** *** **** ********************* ******** *** *** ************* **************** *** * ************ **** ********************* ******** *** *** ************* **************** **** *** * ************ **** ********************* ******** *** *** ************* **************** **** *** * ************ **** ****************************** ******* ************* **************** **** *** ** ************ **** ****************************** ******* ************* **************** **** **** *** ***************** ****************************** ******* ************* ********************* **** **** ***************** ****************************** ******* ************* ********************* **** ***** ***************** ************************************** ************* ********************* **** ***** ***************** ************************************** ************* ********************* **** ***** ***************** ************************************** ************* ************************** ***** ***************** ************************************** ************* ************************** ****** ***************** ************************************** ************* ************************** ****** ***************** ************************************** ************* ************************** ****** ***************** ************************************** ************* ************************** ******* ***************** ************************************** ************* ************************** ******** ***************** ************************************** ************* ************************** ******** ***************** ************************************** ************* ************************** ********* ***************** ************************************** ************* ************************** ********* ***************** ************************************** ************* ************************** ********* ***************** ************************************** ************* ***************************** ********* ***************** ************************************** ************* ***************************** ********* ***************** ************************************** ************* ***************************** ********* ***************** ************************************** ************* ***************************** ********* ***************** ************************************** ************* ********************************* ********* ***************** ************************************** ************* ********************************* ********* 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