hsa -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGGA--UCAACUGGCCUACAAAGUCCCAGUUCUCGGCC-------------------------------------- UCSC ENSEMBL 17:29887031-29887099(+) ptr -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGGA--UCAACUGGCCUACAAAGUCCCAGUUCUCGGCC-------------------------------------- UCSC ENSEMBL 17:25713119-25713187(-) ggo -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGAA--UCAACUGGCCUACAAAGUCCCAGUUCUCGGCC-------------------------------------- ENSEMBL scaffold_25152:1195-1263(+) ppy -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAAGG----UGUCGGA--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCC-------------------------------------- UCSC ENSEMBL 17:26401713-26401781(+) mml -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGGA--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCC-------------------------------------- UCSC ENSEMBL 16:26739902-26739970(+) cja -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGGA--UCAACUGGCCUACAAAGUCCCAGUCCUCGACC-------------------------------------- ENSEMBL Contig57:5899797-5899865(+) tsy --------------------------------------------------------------------------------------------------------------------------------------------- mmr --------------------------------------------------------------------------------------------------------------------------------------------- oga -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGA----UGUCGGA--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCC-------------------------------------- ENSEMBL scaffold_16559:11250-11318(-) tbe --------------------------------------------------------------------------------------------------------------------------------------------- cpo -------------------------------GCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGGU--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCCCCCAGGACCGGCGUCUCCUCCGCUGUCCUCGUCCCAGC UCSC ENSEMBL scaffold_32:15064356-15064460(-) dor -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCAGU--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCC-------------------------------------- ENSEMBL scaffold_18854:19001-19069(-) mmu ---------------------------GAGAGCUGGGUCUUUGCGGGCAAGAUGAGAG----UGUCAGU--UCAACUGGCCUACAAAGUCCCAGUCCUC------------------------------------------ miRbase UCSC ENSEMBL 11:79525471-79525536(+) rno ---------------------------GAGAGCUGGGUCUUUGCGGGCAAGAUGAGGG----UGUCAGU--UCAACUGGCCUACAAAGUCCCAGUCCUCGG---------------------------------------- miRbase UCSC ENSEMBL 10:65901048-65901133(+) str --------------------------------------------------------------------------------------------------------------------------------------------- opr --------------------------------------------------------------------------------------------------------------------------------------------- ocu --------------------------------------------------------------------------------------------------------------------------------------------- bta ---------------------------GAGAGCUGGGUCUUUGCGGGCGAGAUGAAGG----UGUCGGU--UCAACUGGCCUACAAAGUCCCAGUCCUCGG---------------------------------------- UCSC ENSEMBL 19:18311032-18311100(-) ttr ---------------------------GAGAGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGGU--UCAACUGGCCUACAAAGUCCCAGUUCUCGG---------------------------------------- ENSEMBL GeneScaffold_1260:127728-127796(+) vpa --------------------------------------------------------------------------------------------------------------------------------------------- ssc -------------------------------GCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUUGGU--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCCCCCAGGACCGACGGCUCCUCUUCUCCCCUUCCCGGC-- ENSEMBL 12:41119437-41119539(-) cfa -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGGU--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCC-------------------------------------- UCSC ENSEMBL 9:44641934-44642002(-) fca -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGGU--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCC-------------------------------------- ENSEMBL scaffold_151494:3062-3130(+) eca -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCAGU--UCAACUGGCCUACAAAGUCCCAGUCUUCGGCCC------------------------------------- UCSC ENSEMBL 11:40807852-40807921(-) mlu --------------------------------------------------------------------------------------------------------------------------------------------- pva ------------------------------GACUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGAU--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCUGC------------------------------------ ENSEMBL GeneScaffold_1465:131873-131942(+) eeu --------------------------------------------------------------------------------------------------------------------------------------------- sar --------------------------------------------------------------------------------------------------------------------------------------------- cho --------------------------------------------------------------------------------------------------------------------------------------------- dno --------------------------------------------------------------------------------------------------------------------------------------------- ete -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGGA--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCC-------------------------------------- ENSEMBL GeneScaffold_3455:66648-66716(+) laf -------------------------------GCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGUU--UCAACUGGCCUACAAAGUCCCAGUCCUCAGCCCC------------------------------------ ENSEMBL scaffold_58306:7929-7997(+) pca ---------------------------GAGAGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGUU--UCAACUGGCCUACAAAGUCCCAGUCCUCGG---------------------------------------- ENSEMBL GeneScaffold_3007:72765-72833(+) meu ------------------------------GACUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCAAU--UCAACUGGCCUACAAAGUCCCAGUUCUCGGUUCC------------------------------------ ENSEMBL Scaffold451160:529-598(-) mdo -------------------------------AUUGGGUCUUUGUGGGCGAGAUGAGGG----UGUCAGU--UCAACUGGCCUACAAAGUCCCAGUUCUCGGUUCC------------------------------------ miRbase UCSC ENSEMBL 2:504311646-504311711(-) oan ----------------GGUUGUGAUUCCAGAGUCGGGGUUUUGAGGGCGAGAUGAGUUUGU-GUUUUAU--CCAACUGGCCCACAAAGUCCCGCUUUUGGUGGUCACUUUGAUC--------------------------- miRbase UCSC ENSEMBL 2:29910999-29911093(+) gga -------------------------------GCUGGGUCUUUGCGGGCGAGAUGAGAGGUU-CGUGUCU--UCAACUGGCCUACAAAGUCCCAGUUCUCGGCU-------------------------------------- UCSC ENSEMBL 18:6423778-6423847(+) tgu -------------------------------GCUGGGUCUUUGCGGGCGAGAUGAGAGGUU-CCUGUCU--UCAACUGGCCUACAAAGUCCCAGUUCUCGGCU-------------------------------------- ENSEMBL 18:11017772-11017841(+) aca --------------------------------CUGGGUCUUUGCGGGCGAGAUGAGAAGUUUCCUGCCU--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCC-------------------------------------- UCSC ENSEMBL scaffold_174:951291-951360(+) xtr --------------------GUGGUUUCGGAGUCGGGAUUUUGGGGGCGAGAUGAGCUAAU-GAUUUAU--CCAACUGGCCCGCAAAGUCCCGCUUCUGGAAGUCA----------------------------------- miRbase UCSC ENSEMBL scaffold_152:275891-275973(+) dre ------------------------------GGCUGGGUCUUUGCGGGCAAGGUGAGUUUUC-CUUUCAU--UCAACUGGCCUACAAAGUCCCAGUUUUCGG---------------------------------------- UCSC ENSEMBL 6:19214320-19214388(-) gac ------------------------------GGCUGGGUCUUUGCGGGCAAGGUGAGUCCUA-CAUUUGU--UCAACUGGCCUACAAAGUCCCAGUUUCUGG---------------------------------------- UCSC ENSEMBL groupIX:17406749-17406817(+) ola ------------------------------GGCUGGGUCUUUGCGGGCAAGGUGAGUCCUC-CAUUCAU--UCAACUGGCCUACAAAGUCCCAGUUUCUGA---------------------------------------- UCSC ENSEMBL 1:11805735-11805803(+) tru --------------------------------------------------------------------------------------------------------------------------------------------- tni --------------------------CAGAAGCUGGGUCUUUGCGGGCAAGGUGAGUCCUC-AGUUUGU--UCAACUGGCCUACAAAGUCCCAGUGUCUGGCUCACGUGACC----------------------------- miRbase UCSC ENSEMBL Un_random:38919577-38919659(+) cin --------------------------------------------------------------------------------------------------------------------------------------------- csa --------------------------------------------------------------------------------------------------------------------------------------------- dme UGUGUGCCCUUAUUAUGGUUGGGAUUUUUUAGAUCAGCAGUUAUUG-CUAUAUAGCCAUAUUUAUAAAUCUUCUACUGGCCUACUAAGUCCCAACAUAAUGAGAGUAAA-------------------------------- miRbase UCSC ENSEMBL 3L:21567114-21567221(+) cel --------------------------------------------------------------------------------------------------------------------------------------------- * ** * * * * * * ******* * ******* *** **** **** ** *** * ********* ********** * **** **** **** ** *** * ********************** * ********** **** ** **** * ************************ * ***************** ******* * ************************ * * ***************** ******* * ************************ * ** ***************** ******* * ************************ **** ************************* * ************************ ***** ************************* ** * ************************ ***** ************************* * *** * ************************ ***** ************************* * *** * ************************ ***** *************************** **** * ************************ ***** *************************** **** * ************************ ***** *************************** **** ** ************************ ****** * *************************** **** ** ************************ ****** * *************************** **** ** ******************************* ***************************** ******* ******************************* ***************************** ******* ******************************** ***************************** ******* 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