hsa --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- miRbase UCSC ENSEMBL 2:219866367-219866430(-) ptr --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- miRbase UCSC ENSEMBL 2b:224932178-224932240(-) ggo ------------------------------------------------------------------------------------------------------- ppy --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- miRbase UCSC ENSEMBL 2b:110853426-110853489(-) mml --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- miRbase UCSC ENSEMBL 12:82853754-82853817(-) cja --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- ENSEMBL Contig23:880340-880410(-) tsy ------------------------------------------------------------------------------------------------------- mmr --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- ENSEMBL scaffold_1727:247222-247292(-) oga --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- ENSEMBL GeneScaffold_1513:140027-140097(-) tbe --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- ENSEMBL GeneScaffold_3782:86094-86164(-) cpo --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- UCSC ENSEMBL scaffold_89:6176384-6176454(+) dor ------------------------------------------------------------------------------------------------------- mmu ----------------UCCGGCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGGC------ miRbase UCSC ENSEMBL 1:74947232-74947295(-) rno --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- miRbase UCSC ENSEMBL 9:74233499-74233573(-) str ------------------------------------------------------------------------------------------------------- opr ------------------------------------------------------------------------------------------------------- ocu --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- ENSEMBL GeneScaffold_4671:18300-18370(-) bta --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- miRbase UCSC ENSEMBL 2:111347583-111347646(-) ttr --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- ENSEMBL GeneScaffold_1416:170369-170439(-) vpa ------------------------------------------------------------------------------------------------------- ssc ------------------------------------------------------------------------------------------------------- cfa --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- miRbase UCSC ENSEMBL 37:28567566-28567635(-) fca --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- ENSEMBL GeneScaffold_3319:84508-84578(-) eca --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- UCSC ENSEMBL 6:8569804-8569874(-) mlu --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- ENSEMBL GeneScaffold_4660:52869-52939(-) pva --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- ENSEMBL GeneScaffold_2631:20092-20162(-) eeu --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- ENSEMBL scaffold_109553:421-491(-) sar ------------------------------------------------------------------------------------------------------- cho ------------------------------------------------------------------------------------------------------- dno --------------------GCCCCGCGACGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGCAGGGG------- ENSEMBL GeneScaffold_4961:11280-11350(-) ete ------------------------------------------------------------------------------------------------------- laf ------------------------------------------------------------------------------------------------------- pca ------------------------------------------------------------------------------------------------------- meu ------------------------------------------------------------------------------------------------------- mdo ----------------------CCCGCGCCGAGCCCCUCGCA--CAA----ACCGGACCUGAGCGUUUUGUUCGUUCGGCUCGCGUGAGGC------------ miRbase UCSC ENSEMBL 7:173725890-173725952(+) oan ------------------------------------------------------------------------------------------------------- gga ---------------------CCUGGCGUCGAGCCCCACGUG--CAAG---ACCUGACCUGAACGUUUUGUUCGUUCGGCUCGCGUUAGGC------------ miRbase UCSC ENSEMBL 7:23901124-23901188(+) tgu ---------------------CCUGGCGUCGAGCCCCACGUG--CAAU---ACCUGACCUGAACGUUUUGUUCGUUCGGCUCGCGUUAGGCAGGUCCA----- miRbase ENSEMBL 7:10362273-10362344(-) aca ------------------------------------------------------------------------------------------------------- xtr ---------------------CCUGACGCCGAGCCUGACGUG--CAAU---GCUUUGUGUCAACGUUUUGUUCGUUCGGCUCGCGUUAAGCAGGUG------- miRbase UCSC ENSEMBL scaffold_77:1902363-1902432(-) dre ------------------------------------------------------------------------------------------------------- gac ------------------------------------------------------------------------------------------------------- ola ------------------------------------------------------------------------------------------------------- tru ------------------------------------------------------------------------------------------------------- tni -------------UGUACUUGCUUCACGUUGAGCCUCACGCA--CAAU---ACCUGAAGAUGAAGUUUUGUUCGUUCGGCUCGCGUUAUGCAGGU-------- miRbase UCSC ENSEMBL 2:17702696-17702772(-) cin ACGUUGGUCGCACGAUCAAAGCGUCAUUAUUGUUCUGGCGUCAUUAAU---UGCGUCAUAAAAUGCCUUGUUCGUUCGGCUCGCGU----------------- miRbase UCSC ENSEMBL 7q:439603-439685(+) csa ------------------------------------------------------------------------------------------------------- dme -----------CCGGGCAGCGAAUUACU-UGGGCCAAGGGAAUGCAAACUGUGAUCAUCCCGAAAGUUUGUUCGUUUGGCUUAAGUUAUUUUCAUGUCCGACU miRbase UCSC ENSEMBL 2L:857542-857632(+) cel ------------------------------------------------------------------------------------------------------- * * ** ********* **** ** * * *** ** *** * ******************** * * ** ***** ** *** ** * * ********************** * ** ** ** ****** * ** *** *** ** ** * *********************** * ** *** **** ******** ** * *** *** ******* *********************** ******* *** **** ******** **** *** *********** *********************** ******* * ********************** *** ******************************************* * ********************** *** ********************************************* ********************** *** ********************************************* ********************** *** ********************************************* ********************** *** ********************************************* ********************** *** ********************************************* ********************** *** ********************************************* ********************** *** ********************************************* ********************** *** ********************************************* ********************** *** ********************************************* ********************** *** ********************************************* ********************** *** ********************************************* ********************** *** ********************************************* ********************** *** 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