hsa --------UGUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAG-------UGUCAGACCUCUGAAAUUCAGUUCUUCAGCUGGGAUAUCUCU---------------- miRbase UCSC ENSEMBL 5:159912359-159912457(+)
ptr ----CCGAUGUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAG-------UGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUAUCUCUGUCAUCGU-------- miRbase UCSC ENSEMBL 5:162576113-162576210(+)
ggo ----CCGAUGUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAG-------UGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUAUCUCUGUCAUCGU--------              ENSEMBL scaffold_4469:17443-17542(-)
ppy ----CCGAUGUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCUG-------UGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUAUCUCUGUCGUCGU-------- miRbase UCSC ENSEMBL 5:162848366-162848464(+)
mml -------AUGUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAG-------UGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUAUCUCUGUCGUCGU-------- miRbase UCSC ENSEMBL 6:156876692-156876790(+)
cja -----------GUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAG-------UGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUAUCUCUGUC-------------              ENSEMBL Contig135:5849141-5849228(+)
tsy --------UGUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAA-------UGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGGUAUCUCUGUCA------------              ENSEMBL scaffold_27402:17311-17402(-)
mmr --------UGUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAG-------UGUCAGACCUGUGAAUUUCAGUUCUUCAGCUGGGAUAUCUCUGUCGUCGU--------              ENSEMBL GeneScaffold_4496:166897-166992(+)
oga ----------------------------------------------------------------------------------------------------------------------                      
tbe -----------GUAUGCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAG-------CGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGGUAUCUCUGUCAUC----------              ENSEMBL GeneScaffold_2431:272513-272603(+)
cpo -----------GUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAG-------CGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUAUCUCUGUCAUCGU--------         UCSC ENSEMBL scaffold_17:7375697-7375789(+)
dor ----------------------------------------------------------------------------------------------------------------------                      
mmu --------UGUGUAUCCCCAGCUCUGAGAACUGAAUUCCAUGGGUUAUAUCAA-------UGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUAGCUCUGUCAUC---------- miRbase UCSC ENSEMBL 11:43187899-43187963(-)
rno --------UGUGUAUCCUCAGCUCUGAGAACUGAAUUCCAUGGGUUAUAGCAA-------UGUCAGACCUGUGAAGUUCAGUUCUUUAGCUGGGAUAGCUCU---------------- miRbase UCSC ENSEMBL 10:28476368-28476462(-)
str ----------------CUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAG-------UGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUAUCUCUGUC-------------              ENSEMBL GeneScaffold_4072:147982-148064(+)
opr ----------------------------------------------------------------------------------------------------------------------                      
ocu -------AUGUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAG-------UGUCAGACCUGUGAAAUUUAGUUCUUCAGCUGGGAUAUCUCUGUCAUC----------              ENSEMBL scaffold_184508:4228-4322(+)
bta -------AUGUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUAGGUUGUGUCAG-------UGUCAGACCUGUGAAGUUUAGUUCUUUAGCUGGGAUAUCUCUAUCAUC---------- miRbase UCSC ENSEMBL 7:71934149-71934247(+)
ttr ----------------------------------------------------------------------------------------------------------------------                      
vpa -------AUGUGUGUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCCU-------UGUGAGACCUGUGAAGUUUAGUUCUUCAGCUGGGAUAUCUCUGUCA------------              ENSEMBL scaffold_90549:3318-3410(-)
ssc -------AUGUGUAUACUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAU-------UGUCAGACCUGUGAAGUUUAGUUCUUCAGCUGGGAUAUCUCUAUCAUC----------              ENSEMBL 16:60604383-60604477(+)
cfa --------UGUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAG-------UGUCAGACCUGUGAAGUUCAGUUCUUCAGCUGGGAUAUCUCUGUCGUCGU-------- miRbase UCSC ENSEMBL 4:53451736-53451793(-)
fca ----------------------------------------------------------------------------------------------------------------------                      
eca --------UGUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAG-------CGUCAGACCUGUGAAGUUCAGUUCUUCAGCUGGGAUAUCUCUGUCAUCGU-------- miRbase UCSC ENSEMBL 14:19243271-19243335(-)
mlu --------UGUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAG-------UGUCAGACCUGUGAAGUUCAGUUCUUCAGCUGGGAUAGCUCUGUCAUCGU--------              ENSEMBL scaffold_180642:100605-100700(-)
pva --------UGUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAG-------UGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUACCUCUGUCAUCGU--------              ENSEMBL GeneScaffold_2979:244520-244615(+)
eeu ----------------------------------------------------------------------------------------------------------------------                      
sar ----------------------------------------------------------------------------------------------------------------------                      
cho --------UGUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUCUCAG-------UGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUAUCUGUAUCAUCGU--------              ENSEMBL scaffold_127116:1298-1393(-)
dno --------UGUGUAUCCCCAGCUUUGAGAACUGAAUUCCAUGGGUUUUCUCAA-------UGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUAUCUCUGUCAUCGU--------              ENSEMBL GeneScaffold_5131:134985-135080(+)
ete ----------------------------------------------------------------------------------------------------------------------                      
laf -------AUGUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUCGUCUCAG-------UGUCAGACCUGUGAAGUUCAGUUCUUCAGCUGGGAUAUCUCUGUCAUC----------              ENSEMBL scaffold_2876:97311-97405(+)
pca --------UGUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUCGUCUCAG-------UGUCAGACCUGUGGAGUUCAGUUCUUCAGCUGGGAUAUCUCUGUCAUC----------              ENSEMBL scaffold_3386:40854-40947(-)
meu ----------UGUAUCUUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUCUUUG-------UAUCAGACCUAUGAAACUCAGUUCUUCAGCUGGGAUAUCUCUG---------------              ENSEMBL Scaffold180129:696-782(+)
mdo ----------UGUAUCUUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUCUUUG-------UAUCAGACCUAUGAAACUCAGUUCUUCAGCUGGAAUAUCUCUGUCAUC---------- miRbase UCSC ENSEMBL 1:356034884-356034974(+)
oan ----------------CUCAGCUUUGAGAACUGAAUUCCACGGGUUGUGAUUGCAACU-CUGACAGACCCGUGGGGCUCAGUUCUUGAGCU--------------------------- miRbase UCSC ENSEMBL X1:22404743-22404871(-)
gga ---------GUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUAAUUGAAUCCUUUGUCAGACCCAUGGGGCUCAGUUCUUCAGCUUGGAUAUUUCUGUCUUC---------- miRbase UCSC ENSEMBL 13:7555593-7555691(-)
tgu ----------------CUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUAAUUGAAUCUGCUGUCAGACCCAUGGGGCUCAGUUCUUCAGCUUGGAUAUUUCUGUCUUC---------- miRbase      ENSEMBL 4:69209753-69209868(-)
aca ----------------------------------------------------------------------------------------------------------------------                      
xtr ---------------UCUUAGCUUUGAGAACUGAAUUCCAUAGGUUGUUAGAG--------GUUAGACCUAUGGUGCUUAGUUCCAUAGCUUGG------------------------         UCSC ENSEMBL scaffold_3978:4782-4853(-)
dre GAGUUUGUUUUGAGCACUUUUCCCUGAGAACUGAAUUCCAUAGAUGGUGUU-CAUGAA--AAGUUCAUCUAUGG-GCUCAGUUCUUCUGGCAAUCUGUUUAAUGUCUGCUACAAAUUC miRbase UCSC ENSEMBL 13:11738887-11739000(+)
gac ------------------------UGAGAACUGAAUUCCAUAGAUGGUGGCAUCUUCA--GGUGUCAUCUAUGG-GCUCAGUUCUUUUGGUACGGU----------------------         UCSC ENSEMBL groupVI:8371109-8371178(+)
ola ------------------------UGAGAACUGAAUUCCAUAGAUGGUAGCUUUUCUA--GGUGUCAUCUAUGG-GCUCAGUUCUUUUGGCAUGG-----------------------         UCSC ENSEMBL 15:22802329-22802397(-)
tru ----------------------CAUGAGAACUGAAUUCCAUAGAUGGUGACAUUUGUA--UGCUUCAUCUAUGG-GCUCAGUUCUUUUGGCUCG------------------------         UCSC ENSEMBL scaffold_24:612109-612178(-)
tni --------------------GCUGUGAGAACUGAAUUCCAUAGAUGGUGACAUUUGUA--UGUGUCAUCUAUGG-GCUCAGUUCUUUUGGCU--------------------------         UCSC ENSEMBL 17:4971498-4971567(+)
                            ****************  * *  *                  * *  **    * *****    *                             
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                            ***************** * *  *                  * *  **    * *******  *                             
                         *  ***************** * * **             **   * ** **    * *******  *                             
                        *** ***************** * * **             **   * ** **    * *******  * *  *                        
                       **** ***************** *** **             ** ****** **    ********* ****  * *                      
                    ******* ***************** *** **             ** ****** **    ********* **** ** *   *                  
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