hsa --------------------CCUGGCACUGAGAACUGAAUUCCAUAGGCUGUGA-GCUCUAG----CAA-UGCCCUGUGGACUCAGUUCUGGUGCCCGG------------------- miRbase UCSC ENSEMBL 10:104196269-104196341(+)
ptr ---------------------CUGGCACUGAGAACUGAAUUCCAUAGGCUGUGA-GCUCUAG----CAA-UGCCCUGUGGACUCAGUUCUGGUGCCCGG------------------- miRbase UCSC ENSEMBL 10:102832559-102832630(+)
ggo ----------------------------------------------------------------------------------------------------------------------                      
ppy --------------------CCUGGCACUGAGAACUGAAUUCCAUAGGCUGUGA-GCUCUAG----CAAAUGCCCUGUGGACUCAGUUCUGGUGCCCGG------------------- miRbase UCSC ENSEMBL 10:101489794-101489867(+)
mml --------------------CCUGGCACUGAGAACUGAAUUCCAUAGGCUGUGA-GCUCUAG----CAA-UGCCCUGUGGACUCAGUUCUGGUGCCCGG------------------- miRbase              
cja ----------------------------------------------------------------------------------------------------------------------                      
tsy ----------------------------------------------------------------------------------------------------------------------                      
mmr ----------------------------------------------------------------------------------------------------------------------                      
oga --------------------CCUGGCUCUGAGAACUGAACUCCAUAGGCUGUGA-GCUCUAG----CAAAUACCCUAGGGAUUCAGUUCUGGUGCCCGG-------------------              ENSEMBL GeneScaffold_5659:7248-7322(+)
tbe ----------------------------------------------------------------------------------------------------------------------                      
cpo ----------------------------------------------------------------------------------------------------------------------                      
dor --------------------CCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGA-GCUUUAG----CAA-UGCCCUAGGAAUUCAGUUCUAGCG------------------------              ENSEMBL GeneScaffold_1551:107422-107490(+)
mmu GACUGAGAGAACUUUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGA-GCUCUAG----CAGACGCCCUAGGGACUCAGUUCUGGUGCCCGGCUGUGCUAUACCAUC---- miRbase UCSC ENSEMBL 19:46417252-46417360(+)
rno --------------UGGCCACCUGGCCCUGAGAACUGAAUUCCAUAGGCUGUGA-ACUCUAG----CAGAUGCCCUAGGGACUCAGUUCUGGUGCCUGGCUGUGCUA----------- miRbase UCSC ENSEMBL 1:251558047-251558134(+)
str ----------------------------------------------------------------------------------------------------------------------                      
opr --------------------CCUGGCUCUGAGAACUGAAUUCUAUAGGCCGUGA-GCUCUAG----CAGAUACCCUAGGGACUCAGUUCUGGUGCCUGGC------------------              ENSEMBL GeneScaffold_1091:250587-250662(+)
ocu ----------------------------------------------------------------------------------------------------------------------                      
bta ---UAAGAGAACUUUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGA-GCUCUAG----CAAAUGCCCUAGGGACUCAGUUCUGGUGCCCGGCUGUGCUACACCAUC---- miRbase UCSC ENSEMBL 26:23509753-23509858(+)
ttr ---------------------CUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGA-GCUCUAG----CAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGG-------------------              ENSEMBL GeneScaffold_1034:217136-217209(+)
vpa ----------------------------------------------------------------------------------------------------------------------                      
ssc --------GAACUUUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGA-GCUCUAG----CAAAUGCCCUAGGAACUCAGUUCUGGUGCCCGGCUGUGCUAUAGUC------ miRbase      ENSEMBL 14:118471588-118471686(+)
cfa ----------------------------UGAGAACUGAAUUCCAUAGGCUGUGA-GCUUGAG----CAAACAGCCUAGGGACUCAGUUCUGGUG------------------------ miRbase UCSC ENSEMBL 28:17941066-17941126(+)
fca --------------------CCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUAA-GCUCAAG----CAAAUGGCCUAGGGACUCAGUUCUGGUGC-----------------------              ENSEMBL GeneScaffold_5127:287912-287982(+)
eca --------------------CCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGA-GCUCCAG----CAAAUGCCCUAGGGACUCAGUUCUGGUGCCCGG------------------- miRbase UCSC ENSEMBL 1:27716546-27716619(-)
mlu ----------------------------------------------------------------------------------------------------------------------                      
pva ----------------------------------------------------------------------------------------------------------------------                      
eeu --------------------CCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGA-GCUCUAG----CAAACGCCCUAGGGACUCAGUUCUGGUGCCCGG-------------------              ENSEMBL scaffold_182005:966-1040(+)
sar ----------------------------------------------------------------------------------------------------------------------                      
cho ----------------------------------------------------------------------------------------------------------------------                      
dno ----------------------------------------------------------------------------------------------------------------------                      
ete --------------------CCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGA-GCUCUAG----CAAAUGCCCUAGGAGCUCAGUUCUGGUGCCCGG-------------------              ENSEMBL scaffold_302048:4273-4347(-)
laf ----------------------------------------------------------------------------------------------------------------------                      
pca ----------------------------------------------------------------------------------------------------------------------                      
meu ----------------------------------------------------------------------------------------------------------------------                      
mdo ---------------------CUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGA-GCUCAUG----CAAAUGCCCUAGGAAGUCAGUUCUGGAG------------------------ miRbase UCSC ENSEMBL 1:109630336-109630403(-)
oan ----AGGCCCAAAUGCGGUGCUUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGA-GUUGAUG----AGGAUGCCCUAGGGAUUCAGUUCCACAGCCCAGCAACCCACAGCACUGGCCU miRbase UCSC ENSEMBL Contig29185:8147-8255(+)
gga ----------------------UGGCUUUGAGAACUGAAUUCCAUAGGCGUUAAAGCAUCCA----AAAAUGCCCUAUGGAUUCAGUUCUGCAGUUGGGCA----------------- miRbase UCSC ENSEMBL 6:24570060-24570164(+)
tgu ------------------UGCUUGGCUCUGAGAACUGAAUUCCAUAGGCGUUGAAGCCUCCA----AAA-UGCCCUAUGGAUUCAGUUCUGCAGC----------------------- miRbase      ENSEMBL 6:22623576-22623647(+)
aca --------------------CCUAGCUCUGAGAACUGAAUUCCAUAGGCUUUAGAAUAAUUG----AAA-CGCCCCGUGGAUUCAGUUCUACAGCUAGG-------------------         UCSC ENSEMBL scaffold_101:317284-317358(+)
xtr --------CCAAUGGCAGGGCCCGGCUCUGAGAACUGAAUUCCAUGGACUGUUCCACUCACAGCACCCUCAGUCCACAGUGUUCAGUGCUCCAGUCUGGCUGCCACUA---------- miRbase UCSC ENSEMBL scaffold_368:119888-119987(+)
dre --------------------CUUGGCUUUGAGAACUGAAUUCCAAGGG-UGUCUGCUUUAUA-----UUCAGCCCACGGAGUUCAGUUCUUAAGUU----------------------         UCSC ENSEMBL 21:43445991-43446061(-)
gac ----------------------------------------------------------------------------------------------------------------------                      
ola ----------------------------------------------------------------------------------------------------------------------                      
tru ----------------------------------------------------------------------------------------------------------------------                      
tni ----------------------------------------------------------------------------------------------------------------------                      
                                *********** ** *  *    *                     **   *   ***** *    *                        
                            **  ***************** ***  *                     **   *   ********   *                        
                          ****  *********************  *                     **   *   ********   *                        
                          **** ********************** ** *  **         *   *****  * * ********   *                        
                          **** ************************* * ***   *     *   *****  * * ********   *                        
                        ****** *************************** ***   *    **   *****  * * *********  *                        
                        ********************************** ***   *    *** ******  *** ********** **   *                   
                        ********************************** **** **    *** ******  *** ********** **  **                   
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