hsa ------------CCCUGUCUCCCAACCCUUGUACCAGUGCUGGGC-UCA----GACCCUGGUACAGG-CCUGGGG-GACAGGGACCU----------- miRbase UCSC ENSEMBL 19:50004042-50004125(-)
ptr ------------CCCUGUCUCCCAACCCUUGUACCAGUGCUGGGC-UCA----GACCCUGGUACAGG-CCUGGGG-GACAGGGACCU----------- miRbase UCSC ENSEMBL 19:55235683-55235765(-)
ggo ------------CCCUGUCUCCCAACCCUUGUACCAGUGCUGGGC-UCA----GACCCUGGUACAGG-CCUGGGG-GACAGGGACCU-----------              ENSEMBL scaffold_39945:14847-14915(-)
ppy ------------CCCUGUCUCCCAACCCUUGUACCAGUGCUGGGC-UCA----GACCCUGGUACAGG-CCUGGGG-GACAGGGACCU----------- miRbase UCSC ENSEMBL 19:51087615-51087698(-)
mml ------------CCCUGUCUCCCAACCCUUGUACCAGUGCUGGGC-UCA----GACCCUGGUACAGG-CCUGGGG-GACAGGGACCU----------- miRbase UCSC ENSEMBL 19:55765048-55765131(-)
cja ------------CCCUGUCUCCCAACCCUUGUACCAGUGCUGGGC-UCA----GACCCUGGUACAGG-CCUGGGG-GGCAGGGACCU-----------              ENSEMBL Contig471:46403-46471(+)
tsy --------------------------------------------------------------------------------------------------                      
mmr ------------CCCUGUCUCCCAACCCUUGUACCAGUGCUGCCC-UCA----GACCCUGGUACGGG-CGUGGGG-GGCAGGGACCU-----------              ENSEMBL scaffold_21344:6607-6675(-)
oga --------------------------------------------------------------------------------------------------                      
tbe ----------GUCCCCGUCUCCCAACCCUCGUACCAGGGCCAUGCUCAG----A-CCCUGGUGCAG--GGAUGGGGGGCAGGGCCGUGGGGAC-----              ENSEMBL GeneScaffold_2860:21895-21971(-)
cpo ------------CCCUGUCUCCCAACCCUUGUACCAGUGCUGUGCCUCA----GACGCUGGUACAGG-CCUGGGG-GGCAGGGAACU-----------         UCSC ENSEMBL scaffold_70:8005626-8005695(+)
dor ------------CCCUGUCUCCCAACCCUUGUACCAGUGCUGUGC-UCA----GACCCUGGUGCAGG-CCUGGGG-GGCAGGGACCU-----------              ENSEMBL GeneScaffold_3478:19683-19751(-)
mmu -----------GCCCUGUCUCCCAACCCUUGUACCAGUGCUGUGCCUCA----GACCCUGGUACAGG-CCUGGGG-GAUAGGGACUUGGG-------- miRbase UCSC ENSEMBL 7:52377127-52377191(+)
rno ------------CCCUGUCUCCCAACCCUUGUACCAGUGCUGUGCCUCA----GACCCUGGUACAGG-CCUGGGG-GACAGGGACUU----------- miRbase UCSC ENSEMBL 1:95596077-95596161(+)
str ------------CCCUGUCUCCCAACCCUUGUACCAGUGCUGUGCCUUA----GACCCUGGUACAGG-UCUGGGG-GUCAGGGACCU-----------              ENSEMBL GeneScaffold_1137:110348-110417(-)
opr -----CUCACGGCCCUGUCUCCCAACCCUCGUACCAGUGUUGCACAAUA----GACACUGGUACAGGAUUGGGGGCU---------------------              ENSEMBL GeneScaffold_941:80-148(-)
ocu --------------------------------------------------------------------------------------------------                      
bta ------------CCCUGUCUCCCAACCCUUGUACCAGUG-UGUGUCUCA----GACCCUGGUACAGG-UACGGGGAGGCAGGGACC------------ miRbase UCSC ENSEMBL 18:55905298-55905397(-)
ttr ------------CCCUGUCUCCCAACCCUUGUACCAGUGU-GUGCCUCA----GUCCCUGGUACAGG-CAUGGGG-GUCAGGGACCU-----------              ENSEMBL GeneScaffold_639:133519-133587(-)
vpa --------------------------------------------------------------------------------------------------                      
ssc ------------CCCUAUCUCCCAACCCUUGUACCAGUGC-GUGCCUCA----GUCCCUGGUACAGG-AAUGGGG-GGCAGGGACCU-----------              ENSEMBL 6:38211395-38211463(+)
cfa ------------CCCUGUCUCCCAACCCUUGUACCAGUGCUGUGCCUCA----GUCCCUGGUACAGG-CAUGGGG-GGCAGGGACCU----------- miRbase UCSC ENSEMBL 1:109886388-109886444(+)
fca ------------CCCUGUCUCCCAACCCUUGUACCAGUGCUGUGGCUCA----GUCCCUGGUACAGG-UAUGGGG-GGCAGGGACGU-----------              ENSEMBL GeneScaffold_930:61521-61590(-)
eca ------------CCCUGUCUCCCAACCCUUGUACCAGUGCUGUGCCUCG----GUCCCUGGUACAGG-CAUGGGG-GGCAGGGACCU----------- miRbase UCSC ENSEMBL 10:19329710-19329774(-)
mlu --------------------------------------------------------------------------------------------------                      
pva ------------CCCUGUCUCCCAACCCUUGUACCAGUGGUGUGCUGCG----GUCCCUGGUACAGG-CAUGGGG-GGCAGGGACCU-----------              ENSEMBL GeneScaffold_749:120627-120696(-)
eeu --------------------------------------------------------------------------------------------------                      
sar ------------CCCUGUCUCCCAACCCUUGUACCAGCGCUGC---CAA----GUUGCUGGUACAGG-UUUGGGG-GGCAGGGACCUGG---------              ENSEMBL GeneScaffold_4757:66490-66558(-)
cho --------------------------------------------------------------------------------------------------                      
dno --------------------------------------------------------------------------------------------------                      
ete --------------------------------------------------------------------------------------------------                      
laf --------------------------------------------------------------------------------------------------                      
pca --------------------------------------------------------------------------------------------------                      
meu -------------CCCCUCUCCCAACCCUCGUACCAGAGUCCA--UCAG----AGACCCGGUACGGG-CUGUGGGGGAUGGGGAGCCAG---------              ENSEMBL GeneScaffold_2032:2745-2814(-)
mdo -----------------UCUCCCAACCCUUGUACCAGAGUCCA--UCAG----AGACCCGGUACGGG-CUGUGGGGGACGGGGAGUCGGGGCU----- miRbase UCSC ENSEMBL 4:412972134-412972202(+)
oan CGCCCCUCGGCGCCCCCUCUCCCAACCCUUGUACCAGAGCAUAAACUGA----ACCCCUGGUACGGGGCCGUGGGAGAGGGGGAGCCGGGGCCCCGCG miRbase UCSC ENSEMBL Contig7207:1834-1927(+)
gga --------------------------------------------------------------------------------------------------                      
tgu --------------------------------------------------------------------------------------------------                      
aca --------------------------------------------------------------------------------------------------                      
xtr --------------CUCUCUCCCAACCCUUGUACCAGAGUGAUAAUGGG----AACUCUGGUACAGA-GGAUGGCUGAAAGGA--------------- miRbase UCSC ENSEMBL scaffold_382:958342-958405(-)
dre -------CAUCUCCGUCUCUCCCAAUCCUUGUACCAGUGUCUGAUUUACAGAUGACGCUGGACGGGGUUUGGGGGGGGCUGAGGGA------------ miRbase UCSC ENSEMBL 3:29828369-29828447(+)
gac --------------------------------------------------------------------------------------------------                      
ola --------------GUCACUCCCAAUCCUUGUACCAGUGUCCUGCUAU--GGUGGCGCUGGACAGG-UUUGGGGGGGGCUGUGCUG------------         UCSC ENSEMBL 8:25382218-25382287(-)
tru --------------------------------------------------------------------------------------------------                      
tni --------------------------------------------------------------------------------------------------                      
                      ******* *** ******* *                  * **    *      **                        
                     ******** *** ******* *                  * **    *      *** *   *                 
                     ************ ******* *                  ***** * *      *** *   * *               
                 **  ******************** *                * ***** * **     *** *   ***               
                **** ******************** *                * ******* **     *** *   ***               
                **** ******************** *              * * ******* **    **** * * ****              
                **** **********************              * ************    **** * ******              
                ***************************  *           * ************    **** * ******              
                ***************************  * ** * *    * ************    **** * ******* *           
                ****************************** ** * *    * ************   ***** * *********           
                ****************************** ** ***    * ************ * ***** * *********           
                ****************************** ** ***    * ************ * ***** * *********           
                ****************************** ** ***    ************** * ***** * *********           
                ********************************* ***    ************** * ***** * *********           
                ********************************* ***    ************** * ***** ***********           
                ********************************* ***    ************** * ***** ***********           
                ********************************* ***    ************** ******* ***********           
                *************************************    ************** ******* ***********           
                *************************************    ************** ******* ***********           
                *************************************    ************** ******* ***********           
                *************************************    ************** ******* ***********           
                *************************************    ************** ******* ***********           
                *************************************    ************** ******* *********** *         
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           *   **************************************    ************** ***********************       
         **** *************************************** * *****************************************     
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