hsa ----------------UCAAGUGUAACAGCAACUCCAUGUGGACUGUGUACCAAU-UUCCAGUGGAGAUGCUGUUACUUUUGAUGG--------------- miRbase UCSC ENSEMBL 1:220291499-220291583(-)
ptr ----------------UCAAGUGUAACAGCAACUCCAUGUGGACUGUGUACCAAU-UUCCAGUGGAGAUGCUGUUACUUUUGAUGG--------------- UCSC ENSEMBL 1:200725422-200725491(-)
ggo ----------------UCAAGUGUAACAGCAACUCCAUGUGGACUGUGUACCAAU-UUCCAGUGGAGAUGCUGUUACUUUUGAUGG--------------- ENSEMBL GeneScaffold_629:23996-24065(-)
ppy ----------------UCAAGUGUAACAGCAACUCCAUGUGGACUGUGUACCAAU-UUCCAGUGGAGAUGUUGUUACUUUUGAUG---------------- UCSC ENSEMBL 1:29611610-29611678(+)
mml ----------------UCAAGUGUAACAGCAACUCCAUGUGGACUGUGUACCAAU-UUCCAGUGGAGAUGCUGUUACUUUUGAUGG--------------- miRbase UCSC ENSEMBL 1:150245289-150245373(+)
cja --------------UAUCAAGUGUAACAGCAACUCCAUGUGGACCGUGUACCAAU-UUCCAGUGGAGACGCUGUUACUUCUGAUGG--------------- ENSEMBL Contig886:38569-38640(-)
tsy -------AUGGAGUUAUCAAGUGUAACAGCAACUCCAUGUGGAUUGUGUACCAAU-UUCCAGUGGAGAUGCUGUUACGUUUGAUGAUUACCAA-------- ENSEMBL GeneScaffold_3794:147117-147202(-)
mmr -----------------------------------------------------------------------------------------------------
oga ---------------AUCAAGUGUAACAGCAACUCCAUAUGGACUAUGUGCCAAU-UUCCAGUGGAGAUGCUGUUACUUUUGAUGGUUACCAA-------- ENSEMBL GeneScaffold_376:45128-45205(-)
tbe -------AUGGAGUUAUCAAGUGUAACAGCAACUCCACGUGGACUGAAUACCGAU-UUCCAGUGGAGAUGGUGUUACUUCUGAUGAUUACCAA-------- ENSEMBL GeneScaffold_5421:233961-234046(-)
cpo -----------------------------------------------------------------------------------------------------
dor -----------------CAGGUGUAACAGCAACUCCAUGUGGACUGUGAAGCAAU-UCCCAGUGGAGCUGCUGUUACUUCUGAUGG--------------- ENSEMBL GeneScaffold_4557:55112-55180(-)
mmu --------------------GUGUAACAGCAACUCCAUGUGGACUGUGCUCGGAU--UCCAGUGGAGCUGCUGUUACUUCUGAUGGCCUC----------- miRbase UCSC ENSEMBL 1:187137198-187137264(+)
rno --------------------GUGUAACAGCAACUCCAUGUGGACUGUGCACAGAU--CCCAGUGGAGCUGCUGUUACUUUUGAUGGCCUC----------- miRbase UCSC ENSEMBL 13:101312447-101312529(+)
str -----------------------------------------------------------------------------------------------------
opr -----------------------------------------------------------------------------------------------------
ocu -------AUGGAGUUAUCAAGUGUAACAGCAACUCCAUGUGGACUAUGUACCAAU-UUCCAGUGGAGAUGCUGUUACUUUUGAUGGUUACCAA-------- ENSEMBL scaffold_175008:40477-40562(+)
bta -UUCUUAACGGCGUCAUCGAUUGUAACAGCAACUCCAUGUGGACUGUGCGUCAAU-UUCCAGUGGAGAUGCUGUUACUUUUGAUGGCUGCCAAUUCACU-- miRbase UCSC ENSEMBL Un.004.2:1796071-1796167(+)
ttr -----------------CAACUGUAACAGCAACUCCAUGUGGACUGUGCACCAAU-UUCCAGUGGAGAUGCUGUUACUUUUGAUGG--------------- ENSEMBL GeneScaffold_3295:198985-199053(-)
vpa ----------------CCAAGUGUAACAGCAACUCCAUGUGGACUGUGUACCAAU-UUCCAGUGGAGAUGCUGUUACUUUUGAUGG--------------- ENSEMBL GeneScaffold_245:1481706-1481775(-)
ssc -------------------GCUGUAACAGCGACUCCAUGUGGACUGUGCCCCAAU-UUCCAGUGGAGAUGCUGUUACCUUUGACGGCGA------------ ENSEMBL 10:9750924-9750993(-)
cfa --------------------GUGUAACAGCAACUCCAUGUGGAUUGUGUGCCAAU-UUCCAGUGGAGAUGCUGUUACUUUUGAUGGUUAC----------- UCSC ENSEMBL 38:17895063-17895132(-)
fca ----------------UCAAGUGUAACAGCAACUCCAUGUGGACUGUGUACCAAU-GUCCAGUGGAGAUGCUGUUACUUUUGAUGA--------------- ENSEMBL GeneScaffold_2186:212040-212109(-)
eca --------------------GUGUAACAGCAACUCCAUGUGGACUGGGUACCAAU-UUCCAGUGGAGAUGCUGUUACUUUUGAUGGUUAC----------- UCSC ENSEMBL 30:10337934-10338003(-)
mlu ----------------UCAAGUGUAACAGCAACUCCAUGUGGACUGCGUACCAAU-UUCCAGUGGAGAUGCUGUUACUUUUGAUGG--------------- ENSEMBL GeneScaffold_5684:133023-133092(-)
pva ---------------AUCGAGUGUAACAGCAACUCCAUGUGGGCUGUGUACCAAC-UUCCAGUGGAGAUGCUGUUACUUUUGAU----------------- ENSEMBL scaffold_294:204641-204709(-)
eeu ----------------UCAAGUGUAACAGCAACUCCAUGUGGACUGUGUAC-AAU-UUCCAGUGGAGAUGCUGUUAUUUUUGAUGA--------------- ENSEMBL GeneScaffold_609:17085-17153(-)
sar -------------------AGUGUAACAGCAACUCCAUGUGGACCGUGUCCAAG---CCCAGUGGAGAUGCUGUUACUCUCGGCGGCUUC----------- ENSEMBL GeneScaffold_484:20969-21037(-)
cho -----------------CAAAUGUAACAGCAACUCCAUGUGGACUGUGUACCAAU-UUCCAGUGGAGAUGCUGUUACUUUUGAUGG--------------- ENSEMBL GeneScaffold_582:23573-23641(-)
dno -----------------------------------------------------------------------------------------------------
ete -----------------CAAAUGUAACAGCAACUCCAUGUGGACUGUGU-CUAAU-UUCCAGUGGAGAUGCUGUUACUUUUGAUGCUU------------- ENSEMBL GeneScaffold_570:38353-38422(-)
laf -------AUGGAGUUAUCAAAUGUAACAGCAACUCCAUGUGGACCAGGUACCGAC-UUCCAGUGGGGAUGCUGUUACUUUUGAUGGCUACCAA-------- ENSEMBL GeneScaffold_6414:233918-234003(-)
pca -----------------------------------------------------------------------------------------------------
meu -----------------------------------------------------------------------------------------------------
mdo -----------------------------------------------------------------------------------------------------
oan GAGACCAACAGUGUUAUCAUAUGUAACAGCAACUCCAUGUGGAUUAUGC--UGAU-UUCCAGUGGAGAGGCUGUUACUUUUGAUGGAAACUGGCAAACUAC miRbase UCSC ENSEMBL Contig27098:3308-3405(+)
gga ---------------CUCAUAUGUAACAGCAACUCCAUGUGGACUACAC--UGAC-UUCCAGUGGAGAUGCUGUUACUUUUGAUAG--------------- UCSC ENSEMBL 3:19924494-19924562(+)
tgu ---------------CUCAUAUGUAACAGCAACUCCAUGUGGACUACAC--UGAC-UUCCAGUGGAGAUGCUGUUACUUUUGAUGG--------------- miRbase ENSEMBL 3:9653586-9653657(+)
aca ----------------UCAAGUGUAACAGCAACUCCAUGUGGAAUAAGUA--GAU-UUCCAGUGGAGGUGCUGUUACUUUUGAAGCU-------------- UCSC ENSEMBL scaffold_172:760500-760568(-)
xtr -----------------CAGGUGUAACAGCAACUCCAUGUGGACUUGUCCGUA---UUCCAGUGGAGAUGCUGUUACUUUUGAUGGGC------------- miRbase UCSC ENSEMBL scaffold_182:575333-575412(+)
dre -----------------------------------------------------------------------------------------------------
gac -----------------------------------------------------------------------------------------------------
ola -----------------------------------------------------------------------------------------------------
tru -----------------------------------------------------------------------------------------------------
tni ---------------GCUGGAUGUAACAGCAACUCCAUGUGGAAGCUGUAUGUGUGUUCCAGUGGAAGUGCUGUUACCUGCAG------------------ UCSC ENSEMBL 7:7655325-7655393(+)
********* ****** *** ******* * *****
********************** ********* * ****** * *
********************** ********* ********* * ***
********************** * ********** *********** *** *
********************** * * * *********** *********** *****
************************ * * *****************************
************************ * ** *****************************
* ************************ * ** *****************************
* ************************ ** * ** *****************************
** *************************** * *** ******************************
** ***************************** * *** ******************************
************************************** ******************************
************************************** ******************************
*************************************** ******************************
*************************************** ******************************
*************************************** ******************************
*************************************** ******************************
*************************************** ******************************
*************************************** ******************************
*************************************** ******************************
*************************************** ******************************
*************************************** ****************************** *
*************************************** ****************************** *
*************************************** ****************************** * *
**************************************** ****************************** ***
**************************************** **********************************
**************************************** **********************************
* * ******************************************* *************************************
* ** ******************************************* *************************************
************************************************ *************************************
************************************************ *************************************
************************************************* ************************************* ***
*****************************************************************************************************