hsa --------------------------CUGGCUG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCCCUGA-GGGUGCACCACUGGCCCAUCUCACCCAGG---------- UCSC ENSEMBL 16:47538724-47538793(+) ptr ------GGUGAAGGCUGGUGUGCUCACUGGCUG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCUGCCGA-CAGCGUACCA----------------------------- UCSC ENSEMBL Un:651638-651708(-) ggo ------------------------------CCG-AGGUGGGAUCCCGAGGCC----UCUCCGGUCCGCCGA-GGGCGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL scaffold_239719:297-370(+) ppy --------------------------CUGGCUG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCCCUGA-GGGCGCACCACUGGCCCAUCUCACCCAGG---------- UCSC ENSEMBL 16:34405623-34405692(+) mml --------------------------------------------------------------------------------------------------------------- cja --------------------------------------------------------------------------------------------------------------- tsy ----------------------CCCGCCGGCCG-AGGUGGGAUCCCGAGGCCGCCCCCUCCAGUCCGCCGA-GGGCGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL scaffold_217615:147-232(+) mmr --------------------------------------------------------------------------------------------------------------- oga --------------------CCCUCGCCGGCCG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGA-GGGCGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGGGA ENSEMBL scaffold_66550:3734-3819(+) tbe --------------------------CCGGCCGGAGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGA-GGGCGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL scaffold_100944:4196-4274(-) cpo ----------------CCCCGCCUCGCCGGCCCGAGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGA-GGGCGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGGGA UCSC ENSEMBL scaffold_927:5162-5252(-) dor ----------------------CCCGCCGGCCG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGA-GGGCGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL GeneScaffold_6815:1415547-1415628(-) mmu --------------------------------------------------------------------------------------------------------------- rno ----AAGGUGAAGGGCGCCAUCUGGG-GGCCCG-AGGUGGGAUCUCAAGGCC----UCUCCAGUCCUCCAC-CGGAGGA-------------------------------- UCSC ENSEMBL 4:42662514-42662582(-) str ----------------------CCCGCCGGCCG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGA-GGGCGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL scaffold_43919:450-531(-) opr ----------------------CCCGCCGGCCG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGA-GGGCGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL scaffold_8304:25682-25763(+) ocu ----------------CCCGCCGUCGUCGGCCG-AGGUGGGAUCCCGAGGCC----CUUCCAGUCCGCCGA-GGGCGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL GeneScaffold_1357:131572-131659(+) bta --------------------------------------------------------------------------------------------------------------- ttr ----------------------GCCGGCGGCCG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGA-GAGCGCACCACCGGCCCGUCUCGCCCGCCGCGCCG---- ENSEMBL scaffold_116300:51423-51502(+) vpa --------------------------------------------------------------------------------------------------------------- ssc --------------------------------------------------------------------------------------------------------------- cfa --------------------------------------------------------------------------------------------------------------- fca --------------------------------------------------------------------------------------------------------------- eca --------------------------------------------------------------------------------------------------------------- mlu --------------------------------------------------------------------------------------------------------------- pva --------------------------------------------------------------------------------------------------------------- eeu ---------GAAGGCCGGC-UCCGCCUUGGCUG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGA-GUGCGAACCACCUUC------------------------ ENSEMBL scaffold_17201:29-100(+) sar GGUUGUGUAAGGGGCGGGUUGGCGGCCAGGCCG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCUGCCGA-GGGCGUACC------------------------------ ENSEMBL scaffold_212354:4561-4636(+) cho ------------------CCCCAUCGCCGGCCG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGA-GGGCGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGGGA ENSEMBL scaffold_219019:1912-1999(+) dno ------------------------CGCCGGCCG-AGGUGAGAUCCCGAGGCC----UCUCCAGUCCGCCGA-GGGCGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL scaffold_169253:6914-6993(+) ete --------------------------------------------------------------------------------------------------------------- laf --------------------------------------------------------------------------------------------------------------- pca ----------------GCCUCGCUCGCCGGCCG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGA-GGGCGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGGGA ENSEMBL scaffold_4297:1432-1521(+) meu --------------------------------------------------------------------------------------------------------------- mdo --------------------------------------------------------------------------------------------------------------- oan --------------------------------------------------------------------------------------------------------------- gga --------------------------------------------------------------------------------------------------------------- tgu --------------------------------------------------------------------------------------------------------------- aca --------------------------------------------------------------------------------------------------------------- xtr --------------------------------------------------------------------------------------------------------------- dre --------------------------------------------------------------------------------------------------------------- gac --------------------------------------------------------------------------------------------------------------- ola --------------------------------------------------------------------------------------------------------------- tru --------------------------------------------------------------------------------------------------------------- tni ---------------------GCGCGCCGGCCG-AGGUGGGAUCCCGGCGGC-----CGCCAGCCGCCCGCCGGGCGCACCACCGGCCCGUCUCGCCCGCC---------- UCSC ENSEMBL 18:9951049-9951123(+) * ***** **** * * * ** * * * * * * * * * ****************** ******** * * * * *** *** * ****************** ******** **** * *** **** *** * ****************** ********** **** ***** ***** * ***** ****************** *************** *********** ***** **** *** * ***** ****************** *************** ***************** **** *** * * ***** ****************** *************** ***************************** ********* ****************** *************** *********************************** ********* ****************** *************** ************************************* * ********* ****************** *************** ************************************* * ********* ****************** *************** ************************************* * ********* ****************** *************** ************************************* * ********* ****************** *************** ************************************* * ********* ****************** *************** ************************************* * ************ ****************** *************** ************************************* * * ************ ****************** *************** ************************************* ** *** ************* ****************** *************** *************************************** * ****** *** ************* ****************** *************** *************************************** ********************************************** *************** *************************************** ***************************************************************************************************************