hsa ----------------UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUA---GCAGUGCAAUGUUA-AAAGGGCAUUGGCCGUGUAGUG---------------- miRbase UCSC ENSEMBL 11:57408671-57408759(+) ptr -----------------GCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUA---GCAGUGCAAUGUUA-AAAGGGCAUUGGCCGUGUAGUG---------------- miRbase UCSC ENSEMBL 11_random:5956048-5956135(+) ggo ----------------UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUA---GCAGUGCAAUGUUA-AAAGGGCAUUGGCCGUGUAGUG---------------- miRbase ppy ----------------------------------------------------------------------------------------------------------------------------- mml ----------------UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUA---GCAGUGCAAUGUUA-AAAGGGCAUUGGCC------------------------ miRbase UCSC ENSEMBL 14:15771851-15771931(-) cja ----------------------------------------------------------------------------------------------------------------------------- tsy ----------------------------------------------------------------------------------------------------------------------------- mmr ----------------UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUA---GCAGUGCAAUGUUA-AAAGGGCAUUGGCCGUGUAGUG---------------- ENSEMBL GeneScaffold_4061:539328-539417(+) oga ----------------------------------------------------------------------------------------------------------------------------- tbe ----------------UGCUGCUGGCCGGAGCUCUUUUCACAUUGUGCUACUGUCUGCAUCUGUCACUA---GCAGUGCAAUGUUA-AAAGGGCAUUGGC------------------------- ENSEMBL GeneScaffold_4100:47772-47852(+) cpo ----------------------------------------------------------------------------------------------------------------------------- dor ----------------UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUACACCUGUCACGA---GCAGUGCAAUGUUA-AAAGGGCAUUGGCC------------------------ ENSEMBL GeneScaffold_4996:9235-9316(+) mmu ----------------------------GAGCUCUUUUCACAUUGUGCUACUGUCUA-ACGUGUACCGA---GCAGUGCAAUGUUA-AAAGGGCAUC---------------------------- miRbase UCSC ENSEMBL 2:84581272-84581335(-) rno ----------------UGCUGCUGGCCGGAGCUCUUUUCACAUUGUGCUACUGUCUACACGUGUACCGA---GCAGUGCAAUGUUA-AAAGGGCAUCGGCCUUGUAGU----------------- miRbase UCSC ENSEMBL 3:67949594-67949681(-) str ----------------------------------------------------------------------------------------------------------------------------- opr ------------------------GCCAGCGCUCUUUUCACAUUGUGCUACUGUCUGCGCCUAUCACGA---GCAGUGCAAUGUCA-AAAGGGCAUUGGCCUGGUAGU----------------- ENSEMBL scaffold_13234:11531-11611(+) ocu ----------------------------------------------------------------------------------------------------------------------------- bta ----------------UGCUGCGGGCCGGAGCUCUUUUCACAUUGUGCUACUGUCUGCGCCUGUCACUA---GCAGUGCAAUGUUA-AAAGGGCAUUGGCUGUGCAGCG---------------- miRbase UCSC ENSEMBL 15:81392289-81392377(+) ttr ----------------------------------------------------------------------------------------------------------------------------- vpa ----------------------------------------------------------------------------------------------------------------------------- ssc ---------------------CGGGCCGGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUAUCACUA---GCAGUGCAAUGUUA-AAAGGGCAUUGGCCACG--------------------- miRbase ENSEMBL 2:7578748-7578826(-) cfa ------------------------------GCUCUUUUCACAUUGUGCUACUGUCUGCACCUACCACUA---GCAGUGCAAUGUUA-AAAGGGCAU----------------------------- miRbase UCSC ENSEMBL 18:41608990-41609051(-) fca ----------------UGCUGCGGGCCGGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUACCACUA---GCAGUGCAAUGUUA-AAAGGGCAUUGGCCGUGUAGU----------------- ENSEMBL GeneScaffold_4670:172286-172374(+) eca ----------------UGCUGCGGGCCGGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUACCACUA---GCAGUGCAAUGUUA-AAAGGGCAUUGGCCAUGUAGU----------------- miRbase UCSC ENSEMBL 12:17657890-17657953(+) mlu ----------------------------------------------------------------------------------------------------------------------------- pva ----------------------------------------------------------------------------------------------------------------------------- eeu ----------------------------------------------------------------------------------------------------------------------------- sar ----------------------------------------------------------------------------------------------------------------------------- cho ----------------------------------------------------------------------------------------------------------------------------- dno ----------------------------------------------------------------------------------------------------------------------------- ete ----------------UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCGAUCACUA---GCAGUGCAAUGUUA-AAAGGGCAUUGGCC------------------------ ENSEMBL GeneScaffold_6924:13280-13361(+) laf ----------------UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUAUCACUA---GCAGUGCAAUGUUA-AAAGGGCAUUGGCC------------------------ ENSEMBL GeneScaffold_5019:184561-184642(+) pca ----------------------------------------------------------------------------------------------------------------------------- meu ---------------------CUGGCCGGGGCUCUUUUCACAUUGUGCUACUGUCUGCGCUUGUCACUA---GCAGUGCAAUGUAA-AAAGGGCAUUGGC------------------------- ENSEMBL Scaffold75640:586-661(+) mdo ---------------------CUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUAUCACUA---GCAGUGCAAUGUAA-AAAGGGCAUUGGC------------------------- miRbase UCSC ENSEMBL 5:291845601-291845676(+) oan GCCCGGUCCUGUCCUUCGCUCCCGGCCGGAGCUCUUUUCACAUUGUGCUACUGUCUGCGCCCGUCACUA---GCAGUGCAAUGUAAUAAGGGGCUUCGGCGGGGCAGCUGCUACCAUCUCCGGGU miRbase UCSC ENSEMBL Contig83413:58-179(-) gga -------------------------CCAGCGCCCUUUUUAUGUUGUACUACUAGUGAUCAUACACAAA----GCAGUGCAAUGUUA-AAAGGGCAUUGGCC------------------------ miRbase UCSC ENSEMBL 15:408399-408481(-) tgu -----------------------------UGCCCUUUUUAUGUUGUACUACUGGUGAUGAUGCACAAAAA--GCAGUGCAAUGUUA-AAAGGGCAUUGGCC------------------------ ENSEMBL 19:8784949-8785018(-) aca ----------------------UGUCCGGAGCCCUUUUUCUGUUGUACUACUGGCAAGUAUGAGUA------GCAGUGCAAUAUUA-AAAGGGCAUUGGCUGGCAG------------------- UCSC ENSEMBL scaffold_348:575327-575404(+) xtr ---------------------CUGUCCAGUGCCCUUUUUAUGUUGUACUACUAGUGGUCACACACAAAAAAAGCAGUGCAAUGUUA-AAAGGGCAUUGGCCAGGG-------------------- miRbase UCSC ENSEMBL scaffold_92:2370211-2370293(-) dre ----------------------------------------------------------------------------------------------------------------------------- gac ----------------------------------------------------------------------------------------------------------------------------- ola ----------------------------------------------------------------------------------------------------------------------------- tru -------------------UGUUAUCCAAAGCCCUUUUUCUGUUGUACUACUGUGAAAUCAGAUGA------GCAGUGCAAUAUUA-AAAGGGCAUUGGCUG----------------------- UCSC ENSEMBL scaffold_442:91857-91933(+) tni --------------------GUUGUCCUCUGCCCUUUUUCUGUUGCACCACUGGACACUGAGAUGA------GCAGUGCAAUAUUA-AAAGGGCAUUGGCUGAUGA------------------- UCSC ENSEMBL 4:1515775-1515854(+) cin ----------------------------------------------------------------------------------------------------------------------------- csa ----------------------------------------------------------------------------------------------------------------------------- dme ----------------------------------------------------------------------------------------------------------------------------- cel ----------------------------------------------------------------------------------------------------------------------------- ** ***** *** * *** ********** * * ** **** * ** ***** **** ***** ********** * * ********* ** ***** **** ****** * ********** * * ********* *** ** ** ***** * **** ****** * ************ * ********* *** ** * ** ***** * **** ****** * * ************** ************* ** * ** ***** * **** ******** ** * ************** ************* * ** * ************************** * * *** * ************** ************* * ** **************************** * * **** * ************** ************* * **** ****************************** *** **** * ************** ************* * **** ****************************** *** **** * ************** ************* ****** ********************************** ****** ************** ************** ******** ********************************** ****** ************** ************** ********** ********************************** ****** ************** ************** ********************************************* ****** ************** ************** ***************************************************** ************** ************** * ***************************************************** ************** ************** * * ***************************************************** ************** *************** * ** ***************************************************** ************** *************** * ** ***************************************************** ************** ********************* ***************************************************** ************** ********************* ***************************************************** ************** ********************* ***************************************************** ************** ********************** ***************************************************** ************** ********************** ***************************************************** ************** ********************** ****************************************************** ************** ********************** *****************************************************************************************************************************