hsa -----------CCUCCAGGCGCAGGGCAGCCCCUGCCCACCGCACACUGCGCUGCCCC--AGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUGCCUGGGCAGCGCGACC- miRbase UCSC ENSEMBL 11:568089-568198(-) ptr ACCCGGCAGUCCCUCCAGGCGCAGGGCAGCCCCUGCCCACCGCACACUGCGCUGCCCC--AGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUGCCUGGGCAGCGCGACCC miRbase UCSC ENSEMBL 11:604255-604363(-) ggo ACCCGGCAGUCCCUCCAGGCGCAGGGCAGCCCCUGCCCACCGCACACUGCGCUGCCCC--AGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUGCCUGGGCAGCGCGACCC ENSEMBL GeneScaffold_7561:125074-125184(-) ppy ----------------------------------------------------------------------------------------------------------------- mml ACCCGGCAGUCCCUCCAGGCGCAGGGCAGCCCCUGCCCACCGCACACUGCGCUGCCCC--AGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUGCCUGGGCAGCGCGACCC miRbase UCSC ENSEMBL 14:372934-373043(-) cja ----------------------------------------------------------------------------------------------------------------- tsy ----------------------------------------------------------------------------------------------------------------- mmr ----------------------------------------------------------------------------------------------------------------- oga -----------CCUCCAGGCGCAGGGCAGCCACUGCCCACCGCACACUGCGCUGCUCC--AGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGC------- ENSEMBL GeneScaffold_5141:242535-242627(-) tbe ----------------------------------------------------------------------------------------------------------------- cpo -----------CCUCCAGGCGCAGGGCAGCCACUGCCCACCGCACACUGCGCUGCUCC--CGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGCGCGA--- UCSC ENSEMBL scaffold_218:305328-305424(+) dor ----------------------------------------------------------------------------------------------------------------- mmu ----GGCAGUCCCUCCAGGCUCAGGACAGCCACUGCCCACCGCACACUGCGUUGCUCC--GGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGCGCGA--- miRbase UCSC ENSEMBL 7:148407283-148407392(-) rno ----GGCAGUCCCUCCAGGCUCAGGACAGCCACUGCCCACAGCACACUGCGUUGCUCC--GGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGCGCGA--- miRbase UCSC ENSEMBL 1:201415656-201415765(-) str ----------------------------------------------------------------------------------------------------------------- opr -----------CCUCCAGGCGCAGGGCAGCC-CUGCCCACCGCACACUGCGCUGCUCC--GGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGCGCGA--- ENSEMBL scaffold_69898:769-864(-) ocu ----------------------------------------------------------------------------------------------------------------- bta -----------CCUCCAGGCGCAGGGCAGCCACUGCCCACCGCACACUGCGCUGCUCC--GGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGCGCGACC- miRbase ttr -----------CCUCCAGGCGCAGGGCAGCCACUGCCCACCGCACACUGCGCUGCUCC--GGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCUCUGGGCUGCGCGACC- ENSEMBL scaffold_103543:53684-53782(-) vpa ----------------------------------------------------------------------------------------------------------------- ssc -----------CCUCCAGGCGCAGGGCAGCCACUGCCCACCGCACACUGCGCUGCUCC--GGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGCGCGACC- miRbase cfa -----------CCUCCAGGCGCAGGGCAGCCACUGCCCAUCGCACACUGCGCUGCUCC--GGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGCGCGACC- miRbase UCSC ENSEMBL 18:28664843-28664940(-) fca ----------------------------------------------------------------------------------------------------------------- eca ----------------------------------------------------------------------------------------------------------------- mlu -----------CCUCCAGGCGCAGGGCAGCCACUGCCCACCGCACACUGCGCUGCUCC--GGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUUCCUGGGCAGCGCGACC- ENSEMBL scaffold_155225:8297-8395(-) pva ------------CUCCAGGCGCAGGGCAGCCACUGCCCACCGCACACUGCGCUGCUCC--GGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGCGCGA--- ENSEMBL GeneScaffold_2542:32307-32402(-) eeu ----------------------------------------------------------------------------------------------------------------- sar ----------------------------------------------------------------------------------------------------------------- cho ----------------------------------------------------------------------------------------------------------------- dno ----------------------------------------------------------------------------------------------------------------- ete ----------------------------------------------------------------------------------------------------------------- laf ----------------------------------------------------------------------------------------------------------------- pca -----------CCUCCAGGUGCAGGGCAGCCCCUGCCCACCGCACACUGCGCUGCUCC--GGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCUGCGCGAC-- ENSEMBL GeneScaffold_4986:38434-38531(-) meu --------------------GCAGGGGAGCCACUGACCAACGCACAUUGCGCUGA-----GGAC-CCACUGUGCGUGUGACAGCGGCUACCGUGCA----------------- ENSEMBL GeneScaffold_9031:28229-28299(-) mdo --------------------GCAGGGGAGCCACUGACUAACGCACAUUGCGCUCA-----GGAC-CCACUGUGCGUGUGACAGCGGCUACCGUGCA----------------- miRbase UCSC ENSEMBL Un:46252493-46252574(+) oan ----------------------------------------------------------------------------------------------------------------- gga ----------------------------------------------------------------------------------------------------------------- tgu ----------------------------------------------------------------------------------------------------------------- aca -----------------GGAGCAGAUGAGCCACUGACUAACGCACAUUGUGCUU-CUCGUGUCC-CCACUGUGCGUGUGACAGCGGCUAACCUGCUUUU-------------- UCSC ENSEMBL scaffold_73:2238434-2238514(-) xtr --------------------GCAGGUCAGCCACUGACUAACGCACAUUGCGCUGCUCCUAAAAUGCCACUGUGCGUGUGACAGCGGCUAACCAGCA----------------- miRbase UCSC ENSEMBL scaffold_398:268957-269047(+) dre -------------UCUGAAAGCAGGUAAGCCACUGACUAACGCACAUUGCGCCUAUUCUCCACU-CCACUGUGCGUGUGACAGCGGCUAACCAGCUUUUGG------------ miRbase UCSC ENSEMBL 25:26951388-26951460(+) gac -------------UCUAAAAGCAGGUAAGCCACUGACUAACGCACAUUGUGCCAGUGUCCAAAU-UCACUGUGCGUGUGACAGCGGCUAACCUGGUUUUGGGA---------- UCSC ENSEMBL groupXIX:13828838-13828927(-) ola ----------------------------------------------------------------------------------------------------------------- tru -------------UCUAAAAGCAGGUGAGCCACUGACUAACGCACAUUGCGCCAGUUGACAGUU-CCACUGUGCGUGUGACAGCGGCUAACCUGGUUUUGGGAACGCUUCUG- UCSC ENSEMBL scaffold_119:784663-784761(-) tni ----------------------AGGUGAGCCACUGACUAACGCACAUUGUGCCAGUUGACAGUU-CCACUGUGCGUGUGACAGCGGCUAACCUG------------------- miRbase UCSC ENSEMBL 13:6095025-6095106(+) cin ----------------------------------------------------------------------------------------------------------------- csa ----------------------------------------------------------------------------------------------------------------- dme -------------AAGGUGCUUAUUGCAGCUGCUGGCCACUGCACAAGAUUAGACUUA--AGAC--UCUUGUGCGUGUGACAGCGGCUA--UUGUAAGAGGCCAU-------- miRbase UCSC ENSEMBL X:18022252-18022351(+) cel ----------------------------------------------------------------------------------------------------------------- * *** *** * * 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