hsa -----------CCUCCAGGCGCAGGGCAGCCCCUGCCCACCGCACACUGCGCUGCCC--CAGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUGCCUGGGCAGCGCGACC- miRbase UCSC ENSEMBL 11:568089-568198(-)
ptr ACCCGGCAGUCCCUCCAGGCGCAGGGCAGCCCCUGCCCACCGCACACUGCGCUGCCC--CAGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUGCCUGGGCAGCGCGACCC miRbase UCSC ENSEMBL 11:604255-604363(-)
ggo ACCCGGCAGUCCCUCCAGGCGCAGGGCAGCCCCUGCCCACCGCACACUGCGCUGCCC--CAGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUGCCUGGGCAGCGCGACCC              ENSEMBL GeneScaffold_7561:125074-125184(-)
ppy -----------------------------------------------------------------------------------------------------------------                      
mml ACCCGGCAGUCCCUCCAGGCGCAGGGCAGCCCCUGCCCACCGCACACUGCGCUGCCC--CAGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUGCCUGGGCAGCGCGACCC miRbase UCSC ENSEMBL 14:372934-373043(-)
cja -----------------------------------------------------------------------------------------------------------------                      
tsy -----------------------------------------------------------------------------------------------------------------                      
mmr -----------------------------------------------------------------------------------------------------------------                      
oga -----------CCUCCAGGCGCAGGGCAGCCACUGCCCACCGCACACUGCGCUGCUC--CAGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGC-------              ENSEMBL GeneScaffold_5141:242535-242627(-)
tbe -----------------------------------------------------------------------------------------------------------------                      
cpo -----------CCUCCAGGCGCAGGGCAGCCACUGCCCACCGCACACUGCGCUGCUC--CCGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGCGCGA---         UCSC ENSEMBL scaffold_218:305328-305424(+)
dor -----------------------------------------------------------------------------------------------------------------                      
mmu ----GGCAGUCCCUCCAGGCUCAGGACAGCCACUGCCCACCGCACACUGCGUUGCUC--CGGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGCGCGA--- miRbase UCSC ENSEMBL 7:148407283-148407392(-)
rno ----GGCAGUCCCUCCAGGCUCAGGACAGCCACUGCCCACAGCACACUGCGUUGCUC--CGGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGCGCGA--- miRbase UCSC ENSEMBL 1:201415656-201415765(-)
str -----------------------------------------------------------------------------------------------------------------                      
opr -----------CCUCCAGGCGCAGGGCAGCC-CUGCCCACCGCACACUGCGCUGCUC--CGGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGCGCGA---              ENSEMBL scaffold_69898:769-864(-)
ocu -----------------------------------------------------------------------------------------------------------------                      
bta -----------CCUCCAGGCGCAGGGCAGCCACUGCCCACCGCACACUGCGCUGCUC--CGGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGCGCGACC- miRbase              
ttr -----------CCUCCAGGCGCAGGGCAGCCACUGCCCACCGCACACUGCGCUGCUC--CGGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCUCUGGGCUGCGCGACC-              ENSEMBL scaffold_103543:53684-53782(-)
vpa -----------------------------------------------------------------------------------------------------------------                      
ssc -----------CCUCCAGGCGCAGGGCAGCCACUGCCCACCGCACACUGCGCUGCUC--CGGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGCGCGACC- miRbase              
cfa -----------CCUCCAGGCGCAGGGCAGCCACUGCCCAUCGCACACUGCGCUGCUC--CGGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGCGCGACC- miRbase UCSC ENSEMBL 18:28664843-28664940(-)
fca -----------------------------------------------------------------------------------------------------------------                      
eca -----------------------------------------------------------------------------------------------------------------                      
mlu -----------CCUCCAGGCGCAGGGCAGCCACUGCCCACCGCACACUGCGCUGCUC--CGGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUUCCUGGGCAGCGCGACC-              ENSEMBL scaffold_155225:8297-8395(-)
pva ------------CUCCAGGCGCAGGGCAGCCACUGCCCACCGCACACUGCGCUGCUC--CGGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGCGCGA---              ENSEMBL GeneScaffold_2542:32307-32402(-)
eeu -----------------------------------------------------------------------------------------------------------------                      
sar -----------------------------------------------------------------------------------------------------------------                      
cho -----------------------------------------------------------------------------------------------------------------                      
dno -----------------------------------------------------------------------------------------------------------------                      
ete -----------------------------------------------------------------------------------------------------------------                      
laf -----------------------------------------------------------------------------------------------------------------                      
pca -----------CCUCCAGGUGCAGGGCAGCCCCUGCCCACCGCACACUGCGCUGCUC--CGGAC-CCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCUGCGCGAC--              ENSEMBL GeneScaffold_4986:38434-38531(-)
meu --------------------GCAGGGGAGCCACUGACCAACGCACAUUGCGCUGA-----GGAC-CCACUGUGCGUGUGACAGCGGCUACCGUGCA-----------------              ENSEMBL GeneScaffold_9031:28229-28299(-)
mdo --------------------GCAGGGGAGCCACUGACUAACGCACAUUGCGCUCA-----GGAC-CCACUGUGCGUGUGACAGCGGCUACCGUGCA----------------- miRbase UCSC ENSEMBL Un:46252493-46252574(+)
oan -----------------------------------------------------------------------------------------------------------------                      
gga -----------------------------------------------------------------------------------------------------------------                      
tgu -----------------------------------------------------------------------------------------------------------------                      
aca -----------------GGAGCAGAUGAGCCACUGACUAACGCACAUUGUGCUU-CUCGUGUCC-CCACUGUGCGUGUGACAGCGGCUAACCUGCUUUU--------------         UCSC ENSEMBL scaffold_73:2238434-2238514(-)
xtr --------------------GCAGGUCAGCCACUGACUAACGCACAUUGCGCUGCUCCUAAAAUGCCACUGUGCGUGUGACAGCGGCUAACCAGCA----------------- miRbase UCSC ENSEMBL scaffold_398:268957-269047(+)
dre -------------UCUGAAAGCAGGUAAGCCACUGACUAACGCACAUUGCGCCUAUUCUCCACU-CCACUGUGCGUGUGACAGCGGCUAACCAGCUUUUGG------------ miRbase UCSC ENSEMBL 25:26951388-26951460(+)
gac -------------UCUAAAAGCAGGUAAGCCACUGACUAACGCACAUUGUGCCAGUGUCCAAAU-UCACUGUGCGUGUGACAGCGGCUAACCUGGUUUUGGGA----------         UCSC ENSEMBL groupXIX:13828838-13828927(-)
ola -----------------------------------------------------------------------------------------------------------------                      
tru -------------UCUAAAAGCAGGUGAGCCACUGACUAACGCACAUUGCGCCAGUUGACAGUU-CCACUGUGCGUGUGACAGCGGCUAACCUGGUUUUGGGAACGCUUCUG-         UCSC ENSEMBL scaffold_119:784663-784761(-)
tni ----------------------AGGUGAGCCACUGACUAACGCACAUUGUGCCAGUUGACAGUU-CCACUGUGCGUGUGACAGCGGCUAACCUG------------------- miRbase UCSC ENSEMBL 13:6095025-6095106(+)
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                        *****  **** *** * * ****** ******      * **  *********************** * ***    *              
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