hsa --------------------------CUGGCUG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCCCUGAGGG----UGCACCACUGGCCCAUCUCACCCAGG---------- UCSC ENSEMBL 16:47538724-47538793(+) ptr ------GGUGAAGGCUGGUGUGCUCACUGGCUG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCUGCCGACAG----CGUACCA----------------------------- UCSC ENSEMBL Un:651638-651708(-) ggo ------------------------------CCG-AGGUGGGAUCCCGAGGCC----UCUCCGGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL scaffold_239719:297-370(+) ppy --------------------------CUGGCUG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCCCUGAGGG----CGCACCACUGGCCCAUCUCACCCAGG---------- UCSC ENSEMBL 16:34405623-34405692(+) mml ------------------------------------------------------------------------------------------------------------------ cja ------------------------------------------------------------------------------------------------------------------ tsy ----------------------CCCGCCGGCCG-AGGUGGGAUCCCGAGGCCGCCCCCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL scaffold_217615:147-232(+) mmr ------------------------------------------------------------------------------------------------------------------ oga --------------------CCCUCGCCGGCCG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGGGA ENSEMBL scaffold_66550:3734-3819(+) tbe --------------------------CCGGCCGGAGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL scaffold_100944:4196-4274(-) cpo ----------------CCCCGCCUCGCCGGCCCGAGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGGGA UCSC ENSEMBL scaffold_927:5162-5252(-) dor ----------------------CCCGCCGGCCG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL GeneScaffold_6815:1415547-1415628(-) mmu -----------GAAGAGCCCGGCCCGGGGCCCG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGAGGGAGGGCGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- miRbase UCSC ENSEMBL 3:37380281-37380376(+) rno ----AAGGUGAAGGGCGCCAUCUGGG-GGCCCG-AGGUGGGAUCUCAAGGCC----UCUCCAGUCCUCCACCGG----AGGA-------------------------------- UCSC ENSEMBL 4:42662514-42662582(-) str ----------------------CCCGCCGGCCG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL scaffold_43919:450-531(-) opr ----------------------CCCGCCGGCCG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL scaffold_8304:25682-25763(+) ocu ----------------CCCGCCGUCGUCGGCCG-AGGUGGGAUCCCGAGGCC----CUUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL GeneScaffold_1357:131572-131659(+) bta ------------------------------------------------------------------------------------------------------------------ ttr ----------------------GCCGGCGGCCG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGAGAG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCG---- ENSEMBL scaffold_116300:51423-51502(+) vpa ------------------------------------------------------------------------------------------------------------------ ssc ------------------------------------------------------------------------------------------------------------------ cfa ------------------------------------------------------------------------------------------------------------------ fca ------------------------------------------------------------------------------------------------------------------ eca ------------------------------------------------------------------------------------------------------------------ mlu ------------------------------------------------------------------------------------------------------------------ pva ------------------------------------------------------------------------------------------------------------------ eeu ---------GAAGGCCGGC-UCCGCCUUGGCUG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGAGUG----CGAACCACCUUC------------------------ ENSEMBL scaffold_17201:29-100(+) sar GGUUGUGUAAGGGGCGGGUUGGCGGCCAGGCCG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCUGCCGAGGG----CGUACC------------------------------ ENSEMBL scaffold_212354:4561-4636(+) cho ------------------CCCCAUCGCCGGCCG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGGGA ENSEMBL scaffold_219019:1912-1999(+) dno ------------------------CGCCGGCCG-AGGUGAGAUCCCGAGGCC----UCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGG-- ENSEMBL scaffold_169253:6914-6993(+) ete ------------------------------------------------------------------------------------------------------------------ laf ------------------------------------------------------------------------------------------------------------------ pca ----------------GCCUCGCUCGCCGGCCG-AGGUGGGAUCCCGAGGCC----UCUCCAGUCCGCCGAGGG----CGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGGGA ENSEMBL scaffold_4297:1432-1521(+) meu ------------------------------------------------------------------------------------------------------------------ mdo ------------------------------------------------------------------------------------------------------------------ oan ------------------------------------------------------------------------------------------------------------------ gga ------------------------------------------------------------------------------------------------------------------ tgu ------------------------------------------------------------------------------------------------------------------ aca ------------------------------------------------------------------------------------------------------------------ xtr ------------------------------------------------------------------------------------------------------------------ dre ------------------------------------------------------------------------------------------------------------------ gac ------------------------------------------------------------------------------------------------------------------ ola ------------------------------------------------------------------------------------------------------------------ tru ------------------------------------------------------------------------------------------------------------------ tni ---------------------GCGCGCCGGCCG-AGGUGGGAUCCCGGCGGC-----CGCCAGCCGCCCGCCGG---GCGCACCACCGGCCCGUCUCGCCCGCC---------- UCSC ENSEMBL 18:9951049-9951123(+) * ***** **** * * * ** * * * * * * * * * ****************** ******** * * * * *** * * * ****************** ******** **** * ** **** *** * ****************** ********** ******* ** ***** * ***** ****************** ****************** ******** ***** **** *** ***** ****************** ****************** ************** **** *** * * ***** ****************** ****************** ************************** *** ***** ****************** ****************** ******************************** ********* ****************** ****************** ********************************** * ********* ****************** ****************** ********************************** * ********* ****************** ****************** ********************************** * ********* ****************** ****************** ********************************** * ********* ****************** ****************** ********************************** * ********* ****************** ****************** ********************************** * * ********* ****************** ****************** ********************************** * * ************ ****************** ****************** ********************************** *** ************ ****************** ****************** ********************************** ** *** ************* ****************** ****************** ************************************ * ****** ***************** ****************** ****************** ************************************ ********************************************** ****************** ************************************* 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