hsa -----------------CUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGC------------ miRbase UCSC ENSEMBL X:65238712-65238821(+) ptr --------CCUGGCCUCCUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGCUUACCAG----- miRbase UCSC ENSEMBL X:65229619-65229728(+) ggo --------CCUGGCCUCCUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGCUUACCAG----- miRbase ppy --------CCUGGCCUCCUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUAGACACUCCGUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGCUUACCAG----- miRbase mml -----------GGCCUCCUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCGUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCAUAUGCUUACCAG----- miRbase UCSC ENSEMBL X:64563509-64563618(+) cja --------CCUGGCCUCCUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUAGACACUCCGUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGUGACACAUGCUUA--------- ENSEMBL Contig615:578273-578379(+) tsy --------CCUGGUCUCCUGCAGUGCCACACUCC-GUGUAUUUGACAAGCUGAGUGGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCAUAUGC------------ ENSEMBL GeneScaffold_5208:38296-38399(+) mmr ------------GCCUCCUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCGUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGC------------ ENSEMBL scaffold_5858:31606-31705(+) oga -----------------CUGCAGUGCCACACUCU-GUGUAUUUGACAGGCUGAGUGGAACACUCAGUUUAAUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUG---------------------- ENSEMBL scaffold_17181:44076-44160(+) tbe ---------CUGGCCUCCUGCAGUGCUUCACUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACCUGCUUA--------- ENSEMBL GeneScaffold_4687:166021-166126(+) cpo ------------------UGCAGUACCACACUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGC------------ UCSC ENSEMBL scaffold_122:2726051-2726144(+) dor ---------CUGGCUUCCAGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACCUGCCUAGCA------ ENSEMBL GeneScaffold_4193:59528-59636(+) mmu -----------------CUGCAGUGUCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCUGUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGUGGCUCAUGC------------ miRbase UCSC ENSEMBL X:93438156-93438265(+) rno ---------CUGGCCUUCUGCAGUGUUACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCUGUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGUGGCUCAUGCUUA--------- miRbase UCSC ENSEMBL X:83869053-83869162(+) str --------CCUGGCCUCCAGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCGUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCC-AAGUGCGGCACAUGCUUA--------- ENSEMBL GeneScaffold_3572:36168-36273(+) opr ------------------------------------------------------------------------------------------------------------------------------ ocu ------------------------------------------------------------------------------------------------------------------------------ bta ------------GCCUCCUGCAGUGCCAUGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUAGUA-G--UGUCAGUUUG-UCAAAUACCCCAAGUGUGGCAUAUGC------------ miRbase UCSC ENSEMBL X:56723506-56723613(-) ttr ------------GCCUCCUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUAGACACUCCAUGUAGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCAUAUGC------------ ENSEMBL scaffold_96670:13286-13385(+) vpa ------------GCCUCCUGCAGUGCCACACUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUAGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCAUAUGC------------ ENSEMBL scaffold_5225:9168-9267(+) ssc ----------------CCUGCAAUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUAGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCAUAUGC------------ ENSEMBL X:51247491-51247586(-) cfa --------CCUGGCCUCCUGCAGUGCCACACUCC-GUGUAUUUGACAAGCUGAGUUAGACACUCCAUGUGGAA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGC------------ miRbase UCSC ENSEMBL X:53762315-53762417(+) fca ------------------------------------------------------------------------------------------------------------------------------ eca ------------GCCUCCUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGC------------ miRbase UCSC ENSEMBL X:48492588-48492691(+) mlu -----------GGCCUCCUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCAUGUG------------- ENSEMBL GeneScaffold_3652:28397-28496(+) pva --------CCUGGCCUCCUGCAGUGCCACGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGC------------ ENSEMBL GeneScaffold_2372:67467-67570(+) eeu -------------CCUCUUGCAAUGUCACGCUCC-GUGUAUUUGACAAGCUGAGUUAGACACUCCAUAUGGAA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCAUAUGCU----------- ENSEMBL scaffold_364297:5396-5495(+) sar --------------------CAGUGUCACACUCC-GCGUAUUUGACAAGCUGAAUUGGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUG---------------------- ENSEMBL scaffold_196592:11823-11904(+) cho ------------------------------------------------------------------------------------------------------------------------------ dno -----------GGCCUCCUGCAGUGCCACGCUCCCGUGUAUUUGACAAGCUGAGUUGGACACUCCAUAUGGUA-GAGUGUCAGUUUGGUCAAAUACCCCAAGUGCGGCACAUGC------------ ENSEMBL scaffold_45361:14104-14206(+) ete --------------CUCCUGCAGUGCCACGCUCC-GUGUAUUUGAUAAACUGAAUUAGACACUCCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCUCAUGC------------ ENSEMBL scaffold_304610:43393-43490(+) laf --------CCUGGCCUCCUGCAGUGUCACGCUCC-GUGUAUUUGAUAAGCUGAGUUGGACACUUCAUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGCGGCACAUGC------------ ENSEMBL GeneScaffold_4237:4440-4543(+) pca --------CCUGGCCUCCUGCAGUGCUAUGCUAC-GUGUAUUUGAUAAGCUGAGUUGGACACUUCAUGUUGUA-CAGUGUCAGUUUG-UCAAAUACUCUAAGUACAGCACAUGC------------ ENSEMBL scaffold_53998:6932-7035(+) meu ----------------CCUGCAGUGCCACACUCC-GUGUAUUUGACAAGCUGAGUCAGACACUCCGUGUGGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGAGACAUUU-------------- ENSEMBL Scaffold20791:36632-36725(-) mdo ---------------UCCUUCAGUGCCACACUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCGUGUCGUA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGAGGCA----------------- miRbase UCSC ENSEMBL X:10078238-10078348(-) oan GCGACCACGUGACCACACCGCAGUGCCGCGCUCC-GUGUAUUUGACAAGCUGAGUUGGACACUCCGUGUGGUUUGAGUGUCAGUUUG-UCAAAUACCCUAAGUGAGGCAUGCUCACCCAUGUUUGC miRbase UCSC ENSEMBL Contig3675:6073-6196(+) gga -----------------------UGCAGCACUGC-GUGUAUUUGACAAGCUGAGUUUGACACUCAGUCUGGCA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGAGGCACUUGCU----------- miRbase UCSC ENSEMBL 4:232949-233048(+) tgu -----------------------------ACUGC-GUGUAUUUGACAAGCUGAGUCCGACACUCAGUGUG-CA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGAGGCAC---------------- ENSEMBL 4A:6644926-6645003(-) aca ------------------------------------------------------------------------------------------------------------------------------ xtr ----------------------------CACUGA-GUGUAUUUGACAAGCUGAGUCCGACACUCAAUGAGACA-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGAGGCAC---------------- miRbase UCSC ENSEMBL scaffold_239:973555-973640(-) dre ----------------------------CUCUUA-GAGUAUUUGACAGACUGUGGUUGACACUCGAUCUAAAG-GGGUGUCAGUUUG-UCAAAUACCCCAAGAG---------------------- miRbase UCSC ENSEMBL 5:20263881-20263979(-) gac ----------------------------CACUUA-GUGUAUUUGACAAGCUGAGUUGGACACUCUGUAUC-UCUGAGUGUCAGUUUG-UCAAAUACCCCAAGUG---------------------- UCSC ENSEMBL groupVII:17148077-17148150(-) ola ----------------------------CACUUA-GUGUAUUUGACAAGCUGAGUUGGACACUCUAUCUC-UGUGAGUGUCAGUUUG-UCAAAUACCCCAAGUG---------------------- UCSC ENSEMBL 14:17328713-17328786(-) tru ----------------------------CACUUA-GUGUAUUUGACAAGCUGUUCUUGACACUCUUUAUACGC-GAGUGUCAGUUUG-UCAAAUACCCCAAGUG---------------------- UCSC ENSEMBL scaffold_6:1249743-1249816(+) tni -------------------CAGGCCCUUCACUUA-GUGUAUUUGACAAGCUGUGUUUGACACUCUGUAUCUGC-GAGUGUCAGUUUG-UCAAAUACCCCAAGUGAGG------------------- miRbase UCSC ENSEMBL Un_random:92603284-92603368(-) ** * ******** * *** ***** * ********** ******** * *** ** * ******** * *** ****** * * * *********** ********** ***** ** ********** ****** * ******* * * ************* ********** ***** * ** ******************** ******* * * ************* **************** * ** ******************** ******* * * ************* **************** * ** ********************* ******* * * ************* **************** * ** ********************* ******* * * * ************* **************** * * ** * ********************* ******* * * * ************* **************** * * ** ** * ** * ********************* ******* * * *** ************* **************** *** ***** * **** ********************* ******* *** *** ************* **************** *** ****** ** **** ********************* ******* *** *** ************* **************** **** * ********** **** ********************* ******** *** *** ************* **************** **** * ************ **** ********************* ******** ******* ************* **************** **** *** ************ **** ****************************** ******* ************* **************** **** *** ************ **** ****************************** ******* ************* **************** **** *** ************* **** ****************************** ******* ************* **************** **** *** ************** **** ************************************** ************* **************** **** **** ******************* ************************************** 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