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Jerome Waldispuhl, Srinivas Devadas, Bonnie Berger, and Peter Clote,
"Efficient Algorithms for Probing the RNA Mutation Landscape",
PLoS: Computational Biology, August 2008.
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Jerome Waldispuhl, Charles. W. O'Donnell, Srinivas Devadas, Peter Clote, and Bonnie
Berger,
"Modeling Ensembles of Transmembrane β-barrel Proteins,
Proteins: Structure, Function, and Bioinformatics,
Volume 71, Issue 3, pp. 1097-1112 (15 May 2008, digitally published 14 November 2007)
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Blaise Gassend, Charles W. O'Donnell, William Thies, Andrew Lee,
Marten van Dijk, and Srinivas Devadas,
"Learning Biophysically-Motivated Parameters for Alpha Helix
Prediction", BMC Bioinformatics, May 2007.
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Blaise Gassend, Charles W. O'Donnell, William Thies, Andrew Lee,
Marten van Dijk, and Srinivas Devadas,
"Learning Biophysically-Motivated Parameters for Alpha Helix
Prediction", RECOMB 2006 Poster , April 2006.