Krzysztof Onak > Papers > Sketching and Streaming Entropy via Approximation Theory

Approximating Edit Distance in Near-Linear Time

Authors: Alexandr Andoni, Krzysztof Onak
Conference: The 41st ACM Symposium on Theory of Computing (STOC 2009).
Journal: Invited to the special issue of SICOMP on STOC 2009.

Abstract: We show how to compute the edit distance between two strings of length n up to a factor of 2(sqrt(log n)) in n1+o(1) time. This is the first sub-polynomial approximation algorithm for this problem that runs in near-linear time, improving on the state-of-the-art n1/3+o(1) approximation. Previously, approximation of 2(sqrt(log n)) was known only for embedding edit distance into l1, and it is not known if that embedding can be computed in less than n2 time.

Conference version: [PDF] [PS]
A slightly longer recommended version: [PDF] [PS]
BibTeX: [DBLP]