hsa -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGGA--UCAACUGGCCUACAAAGUCCCAGUUCUCGGCC-------------------------------------- UCSC ENSEMBL 17:29887031-29887099(+) -32.6 ((((((((.(((((..(((.((.(((..........))).)).)))..))))).))))))))...... ptr --------------------------------------------------------------------------------------------------------------------------------------------- ggo -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGAA--UCAACUGGCCUACAAAGUCCCAGUUCUCGGCC-------------------------------------- ENSEMBL 5:52726867-52726935(-) -32.6 ((((((((.(((((..(((.((.(((..........))).)).)))..))))).))))))))...... ppy -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAAGG----UGUCGGA--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCC-------------------------------------- UCSC ENSEMBL 17:26401713-26401781(+) -34.6 ((((((((.(((((..(((.((.(((..........))).)).)))..))))).))))))))...... mml -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGGA--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCC-------------------------------------- UCSC ENSEMBL 16:26739902-26739970(+) -35.4 ((((((((.(((((..(((.((.(((..........))).)).)))..))))).))))))))...... cja -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGGA--UCAACUGGCCUACAAAGUCCCAGUCCUCGACC-------------------------------------- ENSEMBL Contig57:5899797-5899865(+) -35.4 ((((((((.(((((..(((.((.(((..........))).)).)))..))))).))))))))...... tsy --------------------------------------------------------------------------------------------------------------------------------------------- mmr --------------------------------------------------------------------------------------------------------------------------------------------- oga -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGA----UGUCGGA--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCC-------------------------------------- ENSEMBL scaffold_16559:11250-11318(-) -35.4 ((((((((.(((((..(((.((.(((..........))).)).)))..))))).))))))))...... tbe --------------------------------------------------------------------------------------------------------------------------------------------- cpo -------------------------------GCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGGU--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCCCCCAGGACCGGCGUCUCCUCCGCUGUCCUCGUCCCAGC UCSC ENSEMBL scaffold_32:15064356-15064460(-) -43.27 ((((((....((.((((.((..((((((((((((((....((((..................))))....)))))))))..)))))..)))))).)).)))))) dor -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCAGU--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCC-------------------------------------- ENSEMBL scaffold_18854:19001-19069(-) -36.1 ((((((((.(((((..(((.((.((((........)))).)).)))..))))).))))))))...... mmu ---------------------------GAGAGCUGGGUCUUUGCGGGCAAGAUGAGAG----UGUCAGU--UCAACUGGCCUACAAAGUCCCAGUCCUC------------------------------------------ miRbase UCSC ENSEMBL 11:79525471-79525536(+) -32.0 (((..(((((.(((((..(((.((.((((........)))).)).)))..))))).)))))..))) rno --------------GCGGACGGGAGCUGAGAGCUGGGUCUUUGCGGGCAAGAUGAGGG----UGUCAGU--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCUCCC----------------------------------- miRbase UCSC ENSEMBL 10:65901048-65901133(+) -50.3 ......((((((((((..(((((.(((((..(((.((.((((........)))).)).)))..))))).)))))..)))))))))) str --------------------------------------------------------------------------------------------------------------------------------------------- opr --------------------------------------------------------------------------------------------------------------------------------------------- ocu -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGGU--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCU-------------------------------------- ENSEMBL scaffold_36:18181588-18181656(+) -36.1 ((((((((.(((((..(((.((.((((........)))).)).)))..))))).))))))))...... bta ---------------------------GAGAGCUGGGUCUUUGCGGGCGAGAUGAAGG----UGUCGGU--UCAACUGGCCUACAAAGUCCCAGUCCUCGG---------------------------------------- UCSC ENSEMBL 19:18311032-18311100(-) -36.0 (((..(((((.(((((..(((.((.((((........)))).)).)))..))))).)))))..))).. ttr ---------------------------GAGAGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGGU--UCAACUGGCCUACAAAGUCCCAGUUCUCGG---------------------------------------- ENSEMBL GeneScaffold_1260:127728-127796(+) -39.3 ((((((((((.(((((..(((.((.((((........)))).)).)))..))))).)))))))))).. vpa --------------------------------------------------------------------------------------------------------------------------------------------- ssc -------------------------------GCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUUGGU--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCCCCCAGGACCGACGGCUCCUCUUCUCCCCUUCCCGGC-- ENSEMBL 12:41119437-41119539(-) -43.77 ((((((.......(((.((((.((((((((((((((....((((..................))))....)))))))).)).)))).)))))))..)))))) cfa -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGGU--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCC-------------------------------------- UCSC ENSEMBL 9:44641934-44642002(-) -36.1 ((((((((.(((((..(((.((.((((........)))).)).)))..))))).))))))))...... fca -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGGU--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCC-------------------------------------- ENSEMBL scaffold_151494:3062-3130(+) -36.1 ((((((((.(((((..(((.((.((((........)))).)).)))..))))).))))))))...... eca --------------------------------------------------------------------------------------------------------------------------------------------- mlu --------------------------------------------------------------------------------------------------------------------------------------------- pva ------------------------------GACUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGAU--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCUGC------------------------------------ ENSEMBL GeneScaffold_1465:131873-131942(+) -33.6 (((((((.(((((..(((.((.((((........)))).)).)))..))))).)))))))......... eeu --------------------------------------------------------------------------------------------------------------------------------------------- sar --------------------------------------------------------------------------------------------------------------------------------------------- cho --------------------------------------------------------------------------------------------------------------------------------------------- ete -----------------------------GGGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGGA--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCC-------------------------------------- ENSEMBL GeneScaffold_3455:66648-66716(+) -35.4 ((((((((.(((((..(((.((.(((..........))).)).)))..))))).))))))))...... laf -------------------------------GCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGUU--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCCCC------------------------------------ ENSEMBL scaffold_31:1083025-1083093(+) -30.4 ((((((.(((((..(((.((.(((((......))))).)).)))..))))).)))))).......... pca ---------------------------GAGAGCUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCGUU--UCAACUGGCCUACAAAGUCCCAGUCCUCGG---------------------------------------- ENSEMBL GeneScaffold_3007:72765-72833(+) -36.5 (((..(((((.(((((..(((.((.(((((......))))).)).)))..))))).)))))..))).. meu ------------------------------GACUGGGUCUUUGCGGGCGAGAUGAGGG----UGUCAAU--UCAACUGGCCUACAAAGUCCCAGUUCUCGGUUCC------------------------------------ ENSEMBL Scaffold451160:529-598(-) -31.3 (((((((.(((((..(((.((.((((........)))).)).)))..))))).)))))))......... mdo ---------------------------GAGGAUUGGGUCUUUGUGGGCGAGAUGAGGG----UGUCAGU--UCAACUGGCCUACAAAGUCCCAGUUCUC------------------------------------------ miRbase UCSC ENSEMBL 2:504311646-504311711(-) -38.5 ((((((((((.((((((((((.((.((((........)))).)).)))))))))).)))))))))) oan ----------------GGUUGUGAUUCCAGAGUCGGGGUUUUGAGGGCGAGAUGAGUUUGU-GUUUUAU--CCAACUGGCCCACAAAGUCCCGCUUUUGGUGGUCACUUUGAUC--------------------------- miRbase UCSC ENSEMBL 2:29910999-29911093(+) -37.7 ....((((((((((((.((((..((((.((((.((.((.((.........)).)).)).)))).))))..)))).)))))).))))))....... gga -------------------------------GCUGGGUCUUUGCGGGCGAGAUGAGAGGUU-CGUGUCU--UCAACUGGCCUACAAAGUCCCAGUUCUCGGCU-------------------------------------- UCSC ENSEMBL 18:6423778-6423847(+) -30.1 ((((((.(((((..(((.((.(((.(((......)))))).)).)))..))))).))))))........ mga --------------------------------------------------------------------------------------------------------------------------------------------- tgu -------------------------------GCUGGGUCUUUGCGGGCGAGAUGAGAGGUU-CCUGUCU--UCAACUGGCCUACAAAGUCCCAGUUCUCGGCU-------------------------------------- ENSEMBL 18:11017772-11017841(+) -30.2 ((((((.(((((..(((.((.((((((....))...)))).)).)))..))))).))))))........ aca --------------------------------CUGGGUCUUUGCGGGCGAGAUGAGAAGUUUCCUGCCU--UCAACUGGCCUACAAAGUCCCAGUCCUCGGCC-------------------------------------- UCSC ENSEMBL scaffold_174:951291-951360(+) -28.1 (((((.(((((..(((.((.((((..((.....)).)))).)).)))..))))).)))))......... xtr --------------------GUGGUUUCGGAGUCGGGAUUUUGGGGGCGAGAUGAGCUAAU-GAUUUAU--CCAACUGGCCCGCAAAGUCCCGCUUCUGGAAGUCA----------------------------------- miRbase UCSC ENSEMBL scaffold_152:275891-275973(+) -37.8 .(((((((((((.((((((((((.((((.((.((...(((....)))..)).)).)))).)))))))))).)))))))).))) dre ------------------------------GGCUGGGUCUUUGCGGGCAAGGUGAGUUUUC-CUUUCAU--UCAACUGGCCUACAAAGUCCCAGUUUUCGG---------------------------------------- UCSC ENSEMBL 6:19214320-19214388(-) -28.5 (((((((.(((((..(((.((.(((((.........))))).)).)))..))))).)))))))..... gac ------------------------------GGCUGGGUCUUUGCGGGCAAGGUGAGUCCUA-CAUUUGU--UCAACUGGCCUACAAAGUCCCAGUUUCUGG---------------------------------------- UCSC ENSEMBL groupIX:17406749-17406817(+) -27.2 (((((((.(((((..(((.((.((((...........)))).)).)))..))))).)))))))..... ola ------------------------------GGCUGGGUCUUUGCGGGCAAGGUGAGUCCUC-CAUUCAU--UCAACUGGCCUACAAAGUCCCAGUUUCUGA---------------------------------------- UCSC ENSEMBL 1:11805735-11805803(+) -28.5 (((((((.(((((..(((.((.(((((.........))))).)).)))..))))).)))))))..... tru --------------------------------------------------------------------------------------------------------------------------------------------- tni --------------------------CAGAAGCUGGGUCUUUGCGGGCAAGGUGAGUCCUC-AGUUUGU--UCAACUGGCCUACAAAGUCCCAGUGUCUGGCUCACGUGACC----------------------------- miRbase UCSC ENSEMBL Un_random:38919577-38919659(+) -36.0 ((((.((((((.(((((..(((.(((.....)))(((((.....))))))))..))))).)))))).))))............ cin --------------------------------------------------------------------------------------------------------------------------------------------- csa --------------------------------------------------------------------------------------------------------------------------------------------- dme UGUGUGCCCUUAUUAUGGUUGGGAUUUUUUAGAUCAGCAGUUAUUG-CUAUAUAGCCAUAUUUAUAAAUCUUCUACUGGCCUACUAAGUCCCAACAUAAUGAGAGUAAA-------------------------------- miRbase UCSC ENSEMBL 3L:21567114-21567221(+) -33.12 ....(((.(((((((((.(((((((((..(((..(((.((.(((.(((....))).)))............)).)))..)))..)))))))))))))))))).))).. cel --------------------------------------------------------------------------------------------------------------------------------------------- * ** * * * * * * ******* * ******* *** **** **** ** *** * ********* ********** * **** **** **** ** *** * ********************** * ********** **** ** **** * ************************ * ***************** ******* * ************************ * * ***************** ******* * ************************ * * ***************** ******* * ************************ ***** ************************* * * ************************ ***** ************************* ** * ************************ ***** ************************* * *** * ************************ ***** ************************* * *** * ************************ ***** *************************** **** * ************************ ***** *************************** **** * ************************ ****** * *************************** **** ** ************************ ****** * *************************** **** ** ******************************* ***************************** ******* ******************************* ***************************** ******* ******************************* ***************************** ******* ******************************* ***************************** ******* ******************************** ***************************** ******* ******************************** ***************************** ******* ******************************** ***************************** ******* ******************************** ***************************** ******* ******************************** ***************************** ******* ******************************** ***************************** ******* ******************************** * ****************************** * ******* ******************************** * ******************************* ** ******* ********************************** ******************************* ** ******* ********************************** * * ******************************* ** ******* *********************************** ** * *************************************** ******* ************************************ **** ***************************************************** ****************************************** ** ****** ** *** * *********************************************************************************************************************************************