hsa -------GCUGCUGUCAGACAGGAAAGAUGGCAAUAUGUUGGCAUAGCAGGUUCCCAGUUCAACAGCUAUGCCAGCAUCUUGCCUCCUCUCCAGUUCCAAGUUACAGGAG--------         UCSC ENSEMBL 9:21512100-21512203(+)          -40.7        .((.((((..(((.(((.((..(((((.(((((((((((((..(((........))).))))))))))))).)))))..)).))).))).......)))).))        
ptr ----------------------------------------------------------------------------------------------------------------------                      
ggo -------GCUGCUGUCAGACAGGAAAGAUGGCAAUAUGUUGGCAUAGCAGGUUCCCAGUUCAACAGCUAUGCCAGCAUCUUGCCUCCUCUCCAGUUCCAAGUUACAGGAG--------              ENSEMBL 9:21963896-21963999(+)          -40.7        .((.((((..(((.(((.((..(((((.(((((((((((((..(((........))).))))))))))))).)))))..)).))).))).......)))).))        
ppy -------GCUGCUGUCAGACAGGAAAGAUGGCAAUAUGUUGGCAUAGCAGGUUCCCAGUUCAACAGCUAUGCCAGCAUCUUGCCUCCUCUCCAGUUCCAAGUUACAGGAG--------         UCSC ENSEMBL 9:40533691-40533794(-)          -40.7        .((.((((..(((.(((.((..(((((.(((((((((((((..(((........))).))))))))))))).)))))..)).))).))).......)))).))        
mml ----------------------------------------------------------------------------------------------------------------------                      
cja ----------------------------------------------------------------------------------------------------------------------                      
tsy -------GCUGCUGUCAGACAGGAAAGAUGGCAAUAUGUUGGCAUAGCAGGUUCUCAGUUCAACAGCUAUGCCAGCAUCUUGCCUCCUCUCCAGUUCCAAGUUACAGGAGCA------              ENSEMBL scaffold_307:9196-9301(+)       -45.6       (((.((((..(((.(((.((..(((((.(((((((((((((..(((........))).))))))))))))).)))))..)).))).))).......)))).))).       
mmr -------GCUGCUGUCAGACAGGAAAGAUGGCAAUAUGUUGGCAUAGCAGGUUCUCAGUUCAACAGCUAUGCCAGCAUCUUGCCUCCUCUCCAGUUCCAAGUUACAGGAGCAAUAC--              ENSEMBL GeneScaffold_681:20533-20642(+) -45.6     (((.((((..(((.(((.((..(((((.(((((((((((((..(((........))).))))))))))))).)))))..)).))).))).......)))).))).....     
oga ----------------------------------------------------------------------------------------------------------------------                      
tbe ----------------------------------------------------------------------------------------------------------------------                      
cpo -------GCUGCAGUCAGACAGGAAAGAUGGCAAUAUGUUGGCAUAGCAGGUUCUCACAUCAACAGCUAUGCCAGCAUCUUGCCUCCUCUCCAGUUCUG-------------------         UCSC ENSEMBL scaffold_2:600452-600544(+)     -38.9              ........(((((.(((.((..(((((.(((((((((((((..(((........))).))))))))))))).)))))..)).))).)).)))             
dor ----------------------------------------------------------------------------------------------------------------------                      
mmu ----------------------------------------------------------------------------------------------------------------------                      
rno UGGCCAAGCUGCUGUCAGACAGGAAAGAUGGCAAUAUGUUGGCAUAGCAGGUUCUCAGUUCAACAGCUAUGCCAGCAUCUUGCCUCCUCUCCAGUUCCAAGUUUCAGGAGCAAUACCA miRbase UCSC ENSEMBL 5:108497643-108497760(+)        -45.6 .((....(((.(((...(((.(((.((..(((((.(((((((((((((..(((........))).))))))))))))).)))))..)).))).)))........))).)))....)).
str ----------------------------------------------------------------------------------------------------------------------                      
opr ----------GCUGUCAGACAGGAAAGAUGGCAAUAUGUUGGCAUAGCAGGUUAUCAGUUCAACAGCUAUGCCAGCAUCUUGCCUUCUCUCCAGAUCCAAGACAG-------------              ENSEMBL scaffold_26987:363-458(+)       -42.4            .(((((.((..(((.(((.(((((.(((((((((((((..(((........))).))))))))))))).))))).))).)))...))...)))))            
ocu ----------------------------------------------------------------------------------------------------------------------                      
bta ----------------------------------------------------------------------------------------------------------------------                      
ttr -------GCUGCUGUCAGACAAGAGAGGUGGCAGUAUGCUGGCAUAGCAGGCUCUCAGUUCAACAGCUAUGCCAGCAUCUUGCCUCCUCUCCAGUUCCAAGUUACAGG----------              ENSEMBL scaffold_111586:44823-44924(+)  -46.13         ....((((..(((..((((((.(((((.(((((((((((((.................))))))))))))).))))).))))))..))).......)))).         
vpa ----------------------------------------------------------------------------------------------------------------------                      
ssc -------GCUGCUGUCAGACAAGAAAGAUGGCAAUAUGUUGGCAUAGCAGGUUCUCAGUUUAACAGCUAUGCCAGCAUCUUGCCUCCUCUCCAGUUCCAAGUUACAGGAGCAA-----              ENSEMBL 1:209939195-209939301(-)        -42.1       (((.((((..(((..((.((..(((((.(((((((((((((..(((........))).))))))))))))).)))))..)).))..))).......)))).)))..      
cfa ----------------------------------------------------------------------------------------------------------------------                      
fca ----------------------------------------------------------------------------------------------------------------------                      
eca ----------------------------------------------------------------------------------------------------------------------                      
mlu -------GCUGCUGUCAGACAAGAGAGAUGGCAAUAUGUUGGCAUAGCAGGUUCUCAGUUCAACAGCUAUGCCAGCAUCUUGCCUCCUCUCCAGUUCCAAGUCACAGGAGCAA-----              ENSEMBL scaffold_1628:34493-34599(+)    -48.4       (((.((((..(((..(((((..(((((.(((((((((((((..(((........))).))))))))))))).)))))..)))))..))).......)))).)))..      
pva -------GCUGCUGUCAGACAAGAGAGAUGGCAAUAUGUUGGCAUAGCAGGUUCUCAGUUCAACAGCUAUGCCAGCAUCUUGCCUCCUCUCCAGUUCCAAGUU---------------              ENSEMBL scaffold_7090:17118-17214(+)    -41.5            ...(((....(((..(((((..(((((.(((((((((((((..(((........))).))))))))))))).)))))..)))))..)))...))).           
eeu ----------------------------------------------------------------------------------------------------------------------                      
sar ----------------------------------------------------------------------------------------------------------------------                      
cho ----------------------------------------------------------------------------------------------------------------------                      
ete -------GCUGCUGUCAGACAAGAAAGAUGGCAAUAUGUUGGCAUAGCAGGUUCUCAGGUCAACAGCUAUGCCAGCAUCUUGCCUCCUCUCCAGUUCCAAGGU---------------              ENSEMBL scaffold_297447:10434-10530(-)  -35.6            ...(((....(((..((.((..(((((.(((((((((((((..(((........))).))))))))))))).)))))..)).))..)))....)))           
laf -------GUUGCUGUCAGACAAGAAAGAUGGCAAUAUGUUGGCAUAGCAGGUUCUCAGUUCAACAGCUAUGCCAGCAUCUUGCCUCCUCUCCAGUUCCAAGUUACAGGAGCAAU----              ENSEMBL scaffold_6:77705566-77705673(-) -39.8      (((.((((..(((..((.((..(((((.(((((((((((((..(((........))).))))))))))))).)))))..)).))..))).......)))).)))...      
pca ----------------------------------------------------------------------------------------------------------------------                      
meu ----------------AGACAAGAAAGAUGGCAAUAUGUUGGCAUAGCAGGUUCUUAGUUCAACAGCUAUGCCAACAUCUUGCCUCCUCUCCAG------------------------              ENSEMBL Scaffold5844:37963-38041(-)     -32.6                     ......((.((..(((((.(((((((((((((..(((........))).))))))))))))).)))))..)).))...                    
mdo ----------------AGACAAGAAAGAUGGCAAUAUGUUGGCAUAGCAGGUUCUCAGUUCAACAGCUAUGCCAACAUCUUGCCUCCUCUCCAG------------------------         UCSC ENSEMBL 6:35734635-35734713(+)          -32.6                     ......((.((..(((((.(((((((((((((..(((........))).))))))))))))).)))))..)).))...                    
oan ----------------------------------------------------------------------------------------------------------------------                      
gga ---------------CAGACAGGAAAGAUGACAAUAUGUUGGCAUAGCAGGUUUUUAGGUUAACAGCUAUGCCAACAUCUUGCCUCCCCUCCAGCUCUGC------------------         UCSC ENSEMBL Z:71882171-71882256(+)          -29.24                 ((((..(((.......(((.(((((((((((((..(((........))).))))))))))))).))).......)))...)))).                 
mga ----------------------------------------------------------------------------------------------------------------------                      
tgu ---------------CAGACAGGAAAGAUGACAAUAUGUUGGCAUAGCAGGUUUUUAGAUCAACAGCUAUGCCAACAUCUUGCCUCCUCUCCAG------------------------              ENSEMBL Z:32186026-32186105(-)          -28.1                    ......(((.((....(((.(((((((((((((..(((........))).))))))))))))).)))....)).)))..                    
aca ---------------CAGACAGGAAAGAGGGCAAUAUGUUGGCAUAGCAGGUUCUUAACUCAUCAGCUAUGCCAACAUCUUGCCUCCGCUCCAG------------------------         UCSC ENSEMBL scaffold_12:4488066-4488145(-)  -34.6                    ......(((....((((((.(((((((((((((.(((.........))).))))))))))))).))))))....)))..                    
xtr ----UCUGGUGCUGGUAGACAAGAAAGAUGGCAAUAGGUUGGCACAACUGGUUUCAGAUGCAACAGCUAUGCCAACAUCUUGCCUCCUCUCUAGAAC---------------------         UCSC ENSEMBL scaffold_78:1969456-1969549(-)  -27.6             (((((....((.((.(((((....(((((...(((((...((.(((....))).))...))))).)))))...))))).))))...)))))..             
dre ----------------------------------------------------------------------------------------------------------------------                      
gac ----------------------------------------------------------------------------------------------------------------------                      
ola ----------------------------------------------------------------------------------------------------------------------                      
tru ----------------------------------------------------------------------------------------------------------------------                      
tni ----------------------------------------------------------------------------------------------------------------------                      
cin ----------------------------------------------------------------------------------------------------------------------                      
csa ----------------------------------------------------------------------------------------------------------------------                      
dme ----------------------------------------------------------------------------------------------------------------------                      
cel ----------------------------------------------------------------------------------------------------------------------                      
                    ***** ** **  * ** ** * ***** * * ** *        * *********** ********** * *** **                        
                    ***** ** ***** **********************   *  * ************* ************ ******                        
                    ***** ** ****************************   *  *************** *******************                        
                   ****** *******************************   ** *************** *******************                        
                   ****** ********************************* ** *************** *******************  *                     
              ** * ****** **************************************************** ******************* **                     
           * ************ ************************************************************************ **                     
           * ************ *******************************************************************************                 
           ************** *******************************************************************************                 
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