hsa ------------CGAGGGGAUACAGCAGCAA-UUCAUGUUUUGAAGUGU-UCUAAAUGGUUCAAAACGUGAGGCGCUGCUAUACCCCCUCGUGGGGAAGGUAGAAGGUGGGG miRbase UCSC ENSEMBL X:133680644-133680741(-) -42.3 (((((((.((.((((((..(((((((((((((.((((...)))).)))))))))))))..)))))).)).)))))))..................... ptr ------------CGAGGGGAUACAGCAGCAA-UUCAUGUUUUGAAGUGU-UCUAAAUGGUUCAAAACGUGAGGCGCUGCUAUACCCCCUCGUGGGGAAGGUAGAAGGUGGG- miRbase UCSC ENSEMBL X:134022268-134022364(-) -42.3 (((((((.((.((((((..(((((((((((((.((((...)))).)))))))))))))..)))))).)).))))))).................... ggo ------------CGAGGGGAUACAGCAGCAA-UUCAUGUUUUGAAGUGU-UCUAAAUGGUUCAAAACGUGAGGCGCUGCUAUACCCCCUCGUGGGGAAGGUAGAAGGUGGGG ENSEMBL X:132481894-132481992(-) -42.3 (((((((.((.((((((..(((((((((((((.((((...)))).)))))))))))))..)))))).)).)))))))..................... ppy ------------CGAGGGGAUACAGCAGCAA-UUCAUGUUUUGAAGUGU-UCUAAAUGGUUCAAAACGUGAGGCGCUGCUAUACCCCCUCGUGGGGAAGGUAGAAGGUGGGG miRbase UCSC ENSEMBL X:134005869-134005966(-) -42.3 (((((((.((.((((((..(((((((((((((.((((...)))).)))))))))))))..)))))).)).)))))))..................... mml ------------CGAGGGGAUACAGCAGCAA-UUCAUGUUUUGAAGUGU-UCUAAAUGGUUCAAAACGUGAGGCGCUGCUAUACCCCCUCGUGGGGAAGGUAGAAGGUGGGG miRbase UCSC ENSEMBL X:132772003-132772100(-) -42.3 (((((((.((.((((((..(((((((((((((.((((...)))).)))))))))))))..)))))).)).)))))))..................... cja --------------AGGGGAUACAGCAGCAA-UUCAUGUUUUGAAGUGC-UCUAAAUGGUUCAAAACGUGAAGUGCUGCUAUACCCCCUUGUGGGGAAGGAAGAAGGUGGG- ENSEMBL Contig251:2402415-2402510(-) -36.4 (((((.((.(((((((.(((((((((((((.((.......)).))))))))))))).))))))).)).)))))...................... tsy ------------CGAGGGGAUGCAGCAGCAA-UUCAUGUUUUGAAGUGC-UCUAAAUGGUUCAAAACGUGAGGCGCUGCUAUACCCCCUCGCGGGCAGGGUGGAAGGUGGGG ENSEMBL scaffold_3660:11848-11946(-) -39.9 (((((((.((.((((((..(((((((((((((.((.......)).)))))))))))))..)))))).)).)))))))..................... mmr ------------CGAGGGGAUGCAGCAGCAA-UUCAUGUUUUGAAGUGC-UCUAAAUGGUUCAAAACGUGAGGCGCUGCUAUACCCCCUCGAGGGGAAGGUAGAAGGUGGG- ENSEMBL GeneScaffold_2802:170820-170917(-) -40.6 (((((((.((.((((((..(((((((((((((.((.......)).)))))))))))))..)))))).)).))))))).................... oga ---------------------------------------------------------------------------------------------------------------- tbe ---------------------------------------------------------------------------------------------------------------- cpo ------------CGAGGGGAUGCAGCAGCAA-UUCAUGUUUUGAAGUAU-UCUAAACUGUUCAAAACGUGAGGCGCUGCUAUACCCCCUCGUGGG----------------- UCSC ENSEMBL scaffold_128:2879307-2879388(-) -40.0 (((((((.((.((((((..(((((((((((((((.......)))..))))))))))))..)))))).)).))))))).... dor -------------GAGGGAAUGCAGCAGCAA-UUCAUGUUUUGGAGUACCUUGAAACGGUUCAAAACGUGAAGCGCUGCUAUAUUCCUUCGUGAGGAAGGUCGAAGUUGGGG ENSEMBL scaffold_53301:1182-1280(-) -39.3 (((((((((.((((((..((((((((((((...(((.......)))))))))))))))..)))))).)))))))))...................... mmu CCUCGUUGACUCCGAAGGGCUGCAGCAGCAA-UUCAUGUUUUGGAGUA--UUGCCAAGGUUCAAAACAUGAAGCGCUGCAACACCCCUUCGUGGGGAAUGUAGAAGGUGGGG UCSC ENSEMBL X:50407396-50407505(-) -43.4 .((((((..((((((((((.((..(((((..(((((((((((((............)))))))))))))..)))))..)).))))))).))).)))).))......... rno ----------------GGGAUGCAGCAGCAA-UUCAUGUUUUGGAGUA--UUGCCAAGGUUCAAAACAUGAAGCGCUGCAACACCCCUUCGUGGG----------------- UCSC ENSEMBL X:140000164-140000240(-) -29.5 (((.((..(((((..(((((((((((((............)))))))))))))..)))))..)).)))........ str ------------CGAGGGGAUGCAGCAGCAA-UUCAUGUUUUGAAGUGC-UCUAAAUGGUUCAAAACGUGAGGCGCUGCUAUACCCCCUCGCGGGGAAGGUUGAAGGUGGGG ENSEMBL GeneScaffold_4170:84228-84326(-) -39.9 (((((((.((.((((((..(((((((((((((.((.......)).)))))))))))))..)))))).)).)))))))..................... opr ---------------------------------------------------------------------------------------------------------------- ocu ------------CGAGGGGAUGCAGCAGCAA-UUCAUGUUUUGAAGUGC-UAUGAUUCAUUCAAAACGUGAGGCGCUGCUAUACCCCCUCGCGGGGAAAAUAGAAGG----- ENSEMBL scaffold_31:22682316-22682409(-) -39.92 (((((((.((.((((((..(((((((((((((.............)))))))))))))..)))))).)).)))))))................ bta --UCGUUGACUCCGAGGGGAUGCAGCAGCAA-UUCAUGUUUUGAAGUGC-UUUAAACGGUUCAAAACGUGAGGCGCUGCUAUACCCCCUUGCGAGGAAGU------------ miRbase UCSC ENSEMBL Un.004.53:446856-446951(-) -45.9 .......((((((((((.((.((((((..(((((((((((((.((.......)).)))))))))))))..)))))).)).))))))).)))..... ttr -----------CGGAGGGGAUGCAGCAGCAA-UUCAUGUUUUGAAGUGC-UUUAAACGGUUCAAAACGUGAGGCGCUGCUAUACCCCCUCGCGAGGAAGUAGGAAGGUGGGG ENSEMBL scaffold_107242:24693-24792(-) -42.8 ((((((((.((.((((((..(((((((((((((.((.......)).)))))))))))))..)))))).)).)))))).))................... vpa ---------------------------------------------------------------------------------------------------------------- ssc ----------UCCGAGGGGAUGCAGCAGCAA-UUCAUGUUUUGAAGGGC-UUUAAAUGGUUCAAAACGUGAGGCGCUGCUAUACCCCCUCGC-------------------- miRbase ENSEMBL X:108499011-108499090(-) -40.8 ..(((((((.((.((((((..((((((((((((...(((......)))))))))))))))..)))))).)).))))))). cfa -----------------------AGCAGCAA-UUCAUGUUUUGAAGUGC-UUUAAAUGGUUCAAAACGUGAGGCGCUGCUAU------------------------------ miRbase UCSC ENSEMBL X:108245185-108245241(-) -25.3 ((((((..((((((((((((...(((......)))))))))))))))..)))))).. fca ---------------------------------------------------------------------------------------------------------------- eca ------------CGAGGGGAUGCAGCAGCAA-UUCAUGUUUUGAAGUGA-UUUAAACGGUUCAAAACGUGAGGCGCUGCUAUACCCCCUCGCGGGGAAGUUGGAAGGUGGGG miRbase UCSC ENSEMBL X:106954949-106955046(-) -42.6 (((((((.((.((((((..(((((((((((((.((.......)).)))))))))))))..)))))).)).)))))))..................... mlu --------ACUCCGAAGGGAUACAGCAGCAA-UUCAUGUUUUGAAGUGC-UUUACAUAGUUCAAAACGUGAGGCGCUGCUAUACCCCCUCGAGGGGAAGUUGGAAGGUGGG- ENSEMBL GeneScaffold_3695:190278-190379(-) -39.5 .((((((.(((.((.((((((..(((((((((((((.((.......)).)))))))))))))..)))))).)).))).))).)))................ pva ---------------------------------------------------------------------------------------------------------------- eeu CUUCUUUGACUCCGAGGGGAUGCAGCAGCAA-UUCAUGUUUUGAAGUAC-UGUAAAUGGUUCAAAACGUGAGGCGCUGCUAUAUCCCUUCGAGGGGAAACUUGAAGGUGGGG ENSEMBL scaffold_361887:53030-53140(+) -51.6 ((((.((..(((((((((((((.((((((..(((((((((((((.((.......)).)))))))))))))..)))))).)))))))))).)))..))...))))...... sar ------------CGAGGGGAUGCAGCAGCAA-UUCAUGUUUUGAAGUGC-UUUCAAAGAUUCAAAACGUGAGGCGCUGCUAUACCCCUUUGGGGGGAAGUUAGAAGGUGG-- ENSEMBL scaffold_186702:10357-10453(+) -37.3 (((((((.((.((((((..(((((((((((((...(((...))).)))))))))))))..)))))).)).)))))))................... cho ---------------------------------------------------------------------------------------------------------------- ete ---------------GGGGAUGCAGCAGCAAAUUCAUGUUUUGGAGUGU-UGUACAAAGUUCAAAACGUGAAGCGCUGCUACACCCCCUCG--------------------- ENSEMBL scaffold_325038:131292-131367(+) -35.6 ((((.((.((((((...(((((((((((((.((.....))...)))))))))))))..)))))).)).))))... laf --UCGUUGACUCCGAGGGGAUGCAGCAGCAA-UUCAUGUUUUGGAGUGC-UCUACAAGGUUCAAAACGUGAGGCGCUGCUAUACCCCCUCGCGGAGAACGGAGAAGGUGGGG ENSEMBL scaffold_100:4463295-4463403(-) -46.1 (((((..((.(((((((.((.((((((..(((((((((((((.((.....))...)))))))))))))..)))))).)).))))))).))..)))))........... pca --------ACUGCGAGUGGAUUCAGCAGCAA-UUCAUGUUUUGGAAUGU-UCUACAAAGUUCAAAACGUGAGUCGCUGCUCUACCCCCUCGCGGGAAAGAGAGAAGGUG--- ENSEMBL scaffold_6097:15014-15113(-) -41.9 .(((((((.((....((((((.((((((((((((((.((.....))...)))))))))))))).))))))....)).)))))))............... meu ---------------------------------------------------------------------------------------------------------------- mdo ---------------------------------------------------------------------------------------------------------------- oan ---------------------------------------------------------------------------------------------------------------- gga ---------------------------------------------------------------------------------------------------------------- mga ---------------------------------------------------------------------------------------------------------------- tgu ---------------------------------------------------------------------------------------------------------------- aca ---------------------------------------------------------------------------------------------------------------- xtr ---------------------------------------------------------------------------------------------------------------- dre ---------------------------------------------------------------------------------------------------------------- gac ---------------------------------------------------------------------------------------------------------------- ola ---------------------------------------------------------------------------------------------------------------- tru ---------------------------------------------------------------------------------------------------------------- tni ---------------------------------------------------------------------------------------------------------------- cin ---------------------------------------------------------------------------------------------------------------- csa ---------------------------------------------------------------------------------------------------------------- dme ---------------------------------------------------------------------------------------------------------------- cel ---------------------------------------------------------------------------------------------------------------- ******** *********** * * ******** *** ***** * * ********* *********** *** * * ******** *** ******* * * ** * * ***** ********* *********** *** * * ************* ********* * *** * * * ***** ********* *********** *** * * * ************* *************** * * * ******** ********* *********** *** * ** * ************* *************** *** * * ******** ********* *********** **** * ** * ****************************** *** * * * ********* ********* **************** * **** ********************************** *** ** **** ********* ********* **************** * **** ********************************** ****** ******* ********* ********* **************** * **** ********************************** ****** ******** ******************* **************** * **** ********************************** ******* ********* ******************* **************** * **** ********************************** ******* * ********* ******************* ***************** * *************************************** ******* * ********* ******************* ***************** * *************************************** ******* * ********* ******************* ***************** ***************************************** ******************** ******************* ***************** ***************************************** ******************** ******************* ***************** ************************************************************** ******************* ***************** ************************************************************** ******************* ***************** ************************************************************** ********************* ***************** ************************************************************** *********************** ***************** ************************************************************** *********************** ***************** ************************************************************** ** ************************** ***************** ************************************************************** ***************************** ***************** ************************************************************** * ***************************** ***************** ************************************************************** 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