hsa AGAUGUGCUCUCCUGGCCCAUGAAAUCAAGCGUGGGUGAGACCUGGUGCAGAACGGGAA-GGCGACCCAUACUUGGUUUCAGAGGCUGUGAGAAUAA------ miRbase UCSC ENSEMBL 3:168269642-168269737(+)             -39.6  ........((((.(((((..((((((((((..((((((...((((........))))....)).))))..))))))))))..))))).)))).... 
ptr -GAUGUGCUCUCCUGGCCCAUGAAAUCAAGCGUGGGUGAGACCUGGUGCAGAACGGGAA-GGCGACCCAUACUUGGUUUCAGAGGCUGCGAGAAUA------- miRbase UCSC ENSEMBL 3:173737675-173737768(+)             -39.6   .......((((.(((((..((((((((((..((((((...((((........))))....)).))))..))))))))))..))))).))))...  
ggo -------------------------------------------------------------------------------------------------------                      
ppy AGAUGUGCUCUCCUGGCCCAUGAAAUCAAGUGUGGGUGAGACCUGGUGCAGAACGGGAA-GGCGACCCAUACUUGGUUUCAGAGGCUGUGAGAAUA------- miRbase UCSC ENSEMBL 3:172088663-172088757(+)             -43.7  ........((((.(((((..((((((((((((((((((...((((........))))....)).))))))))))))))))..))))).))))...  
mml AGAUGUGCUCUCCUGGCCCAUGAAAUCAAGCGUGGGUGAGACCUGGUGCAGAACAGGAA-GGCGACCCAUACUUGGUUUCAGAGGCUGCGAGAAUA------- miRbase UCSC ENSEMBL 2:118520037-118520131(-)             -40.3  ........((((.(((((..((((((((((..((((((...((((........))))....)).))))..))))))))))..))))).))))...  
cja -------------------------------------------------------------------------------------------------------                      
tsy -GAUGUACUCUCCUGGCCGGUGAGAUCAAGCAUGGGUGAGACCUGGUGCA---CAGGAA-GGCGACCCAUACUUGGUUUCAGAGGCUGCGAGAAU--------              ENSEMBL scaffold_6426:2636-2726(+)           -40.3     .......((((.(((((..((((((((((.(((((((...((((.....))))....)).))))).))))))))))..))))).))))..    
mmr AGAUGUGCUCUCCUGGCCCAUGAAAUCAAGCGUGGGUGAGACCUGGUGCAGAACAGGAA-GGCGACCCAUACUUGGUUUCAGAGGCUGUGAGAAUA-------              ENSEMBL scaffold_4640:34986-35081(+)         -40.3  ........((((.(((((..((((((((((..((((((...((((........))))....)).))))..))))))))))..))))).))))...  
oga --------------GGCCCGUGAAAUCAAGCGUGGGUGAGACCUGGUGCAGAACAGGAA-GGCGACCCACACUUGGUUUCAGGGGCUGUGAGAA---------              ENSEMBL scaffold_107994:7989-8068(+)         -41.7          (((((.((((((((((.(((((((...((((........))))....)).))))).)))))))))).))))).......          
tbe AGAUGUGCUCUCCUGGCCCAUGAAAUCAAGCGUGGGUGAGACCUGGUGCAGAACAGGAA-GGCGACCCAUACUUGGUUUCAGAGGCUGUGAGAAU--------              ENSEMBL GeneScaffold_5780:87700-87794(+)     -40.3   ........((((.(((((..((((((((((..((((((...((((........))))....)).))))..))))))))))..))))).))))..  
cpo ----GUGCUCUUGUGGCCCAGGAAAUCAAGCGUGGGUGAGACCUGGUGCGGAAGGGGAA-GGCGACCCAUACUUGGUUUCAGAGGCUGCAAGAAUACC-----         UCSC ENSEMBL scaffold_100:1116222-1116315(+)      -41.0   (((.(((((..(((...(((((((((..((((((...(((........)))......)).))))..)))))))))...)))..))))).))).   
dor ----------------CCCAUGAAAUCAAGCGUGGGUGAGACCUGGUGCAGAACAGGAA-GGCGACCCAUACUUGGUUUCAGAGGCUG---------------              ENSEMBL scaffold_369:121630-121701(+)        -29.3              ((..((((((((((..((((((...((((........))))....)).))))..))))))))))..))...              
mmu ----GUGCUCUUGUGGCCCAUGAAAUCAAGCUUGGGUGAGACCUGGUGCAGAACAGGAA-GGCGACCCAUACUUGGUUUCAGUGGCUGCAAGAAUGACUGCAU miRbase UCSC ENSEMBL 3:29315745-29315842(+)               -43.3 (((((((((..(((..((((((((((..((((((...((((........))))....)).))))..))))))))))..)))..)))))......))))
rno ----GUGCUCUUGUGGCCCAUGAAAUCAAGCUUGGGUGAGACCUGGUACAGAACAGGAA-GGCGACCCAUACUUGGUUUCAGUGGCUGCAAGAAUGGCUCUAU miRbase UCSC ENSEMBL 2:114095878-114095975(+)             -42.7 ..(((((((..(((..((((((((((..((((((...((((........))))....)).))))..))))))))))..)))..)))))...)).....
str -------------------------------------------------------------------------------------------------------                      
opr -------CUCUCGUGGCCCGUGAAAUCAAGCGUGGGUGAGACCUGGUGCAGAA-GGGAA-GGCGACCCAUACUUGGUUUCAGAGGCUGUGAG-----------              ENSEMBL scaffold_50778:3792-3875(+)          -38.3        ..((((..(((..((((((((((..((((((...(((........))).....)).))))..))))))))))..)))..))))        
ocu AGAUGAGCUCUCCUGGCCCAUGAAAUCAAGCGUGGGUGAGACCUGGUGCAGAACAGGAA-GGCGACCCAUACUUGGUUUCAGAGGCUGCGAGAAUA-------              ENSEMBL scaffold_6:32099278-32099373(-)      -40.3  ........((((.(((((..((((((((((..((((((...((((........))))....)).))))..))))))))))..))))).))))...  
bta AGAGAAGUUCUCCUGGCCUAAGAAAUCAAGCGUGGGUGAGACCUGGUGCAGAACAGGAA-GGCGACCCAUACUUGGUUUCAGAGGCUGUGAGAAUA------- miRbase UCSC ENSEMBL 1:101235421-101235515(-)             -42.4  ......((((((.((((((..(((((((((..((((((...((((........))))....)).))))..)))))))))..)))))).)))))).  
ttr -----UGCUCUCCUGGCCUAAGAAAUCAAGCAUGGGUGAGACCUGGUGCAGAACAGGAA-GGCGACCCAUACUUGGUUUCAGAGGCUGUGAGAAUA-------              ENSEMBL scaffold_110055:274922-275012(+)     -39.5     ...((((.((((((..(((((((((.(((((((...((((........))))....)).))))).)))))))))..)))))).))))...    
vpa -----UGCUCUCCUGGCCCAUGAAAUCAAGCGUGGGUGAGACCUGGUGCAGAACAGGAA-GGCGACCCAUACUUGGUUUCAGAGGCUGUGAGAA---------              ENSEMBL GeneScaffold_2659:1589661-1589749(+) -40.3      ...((((.(((((..((((((((((..((((((...((((........))))....)).))))..))))))))))..))))).)))).     
ssc -------------------------------------------------------------------------------------------------------                      
cfa ----GUGCUCUCCUGGCCCAUGAAAUCAAGUGUGGGUGAGACCUGGUGCACAGCGGGAA-GGCGACCCAUACUUGGUUUCAGAGGCUGCGAGAAU-------- miRbase UCSC ENSEMBL 34:36298219-36298308(+)              -42.7     ....((((.(((((..((((((((((((((((((...((((........))))....)).))))))))))))))))..))))).))))..    
fca -------------------------------------------------------------------------------------------------------                      
eca -------------------AUGAAAUCAAGCGUGGGUGAGACCUGGUGCAGAACGGGAA-GGCGACCCAUACUUGGUUUCAG--------------------- miRbase UCSC ENSEMBL 19:9177992-9178053(+)                -26.2                   .((((((((((..((((((...((((........))))....)).))))..)))))))))).                  
mlu -------------------------------------------------------------------------------------------------------                      
pva AGAUGUGCCCUCCUGGCCCAUGAAAUCAAGCAUGGGUGAGACCUGGUGCAGAACAGGAA-GGCGACCCAUACUUGGUUUCAGAGGCUGCGAGAAUA-------              ENSEMBL scaffold_467:86033-86128(+)          -38.4  .........(((.(((((..((((((((((.(((((((...((((........))))....)).))))).))))))))))..))))).)))....  
eeu -------CUCUCCUGGCCCAUGAAAUCAAGCCUGGGUGAGACCUGGUACAGAACAAGAAAGGCGACCCAUACUUGGUUUCAGAGGCUAUGAG-----------              ENSEMBL scaffold_214978:7759-7844(-)         -32.5       ..(((.(((((..((((((((((..(((((....(((.((.....)).....)))..)))))..))))))))))..))))).)))       
sar ---UGUGCUCUCUUGGUCUAUGAAAUCAAGCGUGGGUGAGACCUGGUGCAGAACAGGAA-GGCGACCCAUACUUGGUUUCAGAGGCUGAGAGAAUA-------              ENSEMBL scaffold_54744:1773-1865(-)          -43.6    .....(((((..((((.((((((((((..((((((...((((........))))....)).))))..)))))))))).))))..)))))...   
cho -------------------------------------------------------------------------------------------------------                      
ete --------UCUCGUGGCCCAUGAAAUCAAGCAUGGGUGAGACCUGGUGCAGAACAGGAA-GGCGACCCAUACUUGGUUUCAGAGGCUGCGAGAA---------              ENSEMBL scaffold_265869:13635-13720(-)       -45.8       (((((..(((..((((((((((.(((((((...((((........))))....)).))))).))))))))))..)))..))))).       
laf -------------------------------------------------------------------------------------------------------                      
pca -------GUCCCGUGGCCCAUGAAAUCAAGCGUGGGUGAGACCUGGUGCAAAACAGGAA-GGCGACCCAUACUUGGUUUCAGAGGCUGCGAGAAUA-------              ENSEMBL scaffold_27838:14599-14687(+)        -41.7      .((.((..(((..((((((((((..((((((...((((........))))....)).))))..))))))))))..)))..)).))...     
meu -------------------------------------------------------------------------------------------------------                      
mdo ----------------CCCCAGAAAUCAAGGAUGGGUGAGACCUCGUGUGCAAACUGAAAGGCGACCCAUACUUGGUUUCAGGGGCU---------------- miRbase UCSC ENSEMBL 7:234027689-234027759(-)             -29.3              ((((.(((((((((.((((((....(((...((....))....)))..)))))).))))))))).))))..              
oan -------------------------------------------------------------------------------------------------------                      
gga -----------------UCCAGAAAUCAAGGGUGGGUAAGACCUUGUAGGAUAACUGGCAGGCGACCCAUACUUGGUUUCAGGGGCUGUG-------------         UCSC ENSEMBL 9:21966420-21966493(-)               -27.7             (((.(((((((((..(((((.....(((((((.....)).)))))..)))))..))))))))).)))......             
mga -----------------UCCAGAAAUCAAGGGUGGGUAAGACCUCGUAGGACAACUGGCAGGCGACCCAUACUUGGUUUCAGGGGCUGUG-------------         UCSC ENSEMBL 11:20975630-20975703(-)              -27.6             (((.(((((((((..(((((....(((..(((.....)))..)))..)))))..))))))))).)))......             
tgu -----------------UCCAGAAAUCAAGGGUGGGUAAGACCUGGUGAGCAAACUCUAAGGCGACCCAUACUUGGUUUCAGGGGCUGUG-------------              ENSEMBL 9:23617026-23617099(-)               -29.2             (((.(((((((((..(((((....(((...(((....)))..)))..)))))..))))))))).)))......             
aca ---------------GCUCCAGAAAUCAAGGUUGGGUGAGACCUCGUGAACAGACUGGAAGGCGACCCAUACUUGGUUUCAGGAGC-----------------         UCSC ENSEMBL scaffold_630:661020-661091(+)        -27.8              (((((.(((((((((..((((((...((..((......)).))....)).))))..))))))))).)))))              
xtr -----------------CUUAGAAAUCAAGCUUGGGUUAGACCUGGUUCUUAUACACUGAGGCGACCCAUACUUGGUUUCUGAGGCUG---------------         UCSC ENSEMBL scaffold_3:3597323-3597394(+)        -29.4              (((((((((((((..((((((...((((((........))).))).))))))..)))))))))))))....              
dre -------------------------------------------------------------------------------------------------------                      
gac -------------------------------------------------------------------------------------------------------                      
ola -------------------------------------------------------------------------------------------------------                      
tru -------------------------------------------------------------------------------------------------------                      
tni -------------------------------------------------------------------------------------------------------                      
cin -------------------------------------------------------------------------------------------------------                      
csa -------------------------------------------------------------------------------------------------------                      
dme -------------------------------------------------------------------------------------------------------                      
cel -------------------------------------------------------------------------------------------------------                      
                         ** ******  ***** ****** **             ********* ********** *                     
                         *********  ***** ****** **             **********************  **                 
                         *********  ***** ****** **         *   ********************** ****                
                         *********  ***** ****** **    *    * * ********************** ****                
                         *********  ***************    **   * * ********************** *****               
                     *   *********  *****************  **   *** ********************** *****               
                    ***  *********  ****************** **   *** ********************** *****               
                   ****  ********** ****************** **  **** ********************** *****               
                  *****  ********** ****************** *** **** ********************** ***** ***           
             *   ****************** ********************** **** **************************** ***           
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