hsa --GCUUUUAUAUUGUAGGUUUUUGCUCAUGCACCAUGGUUGUCUGAGCAUGCAGCAUGCUUGUCUGCUCAUACCCCAUGGUUUCUGAGCAGGAACCUUCAUUGUCUACUGC- miRbase UCSC ENSEMBL X:151561893-151562001(-)          -44.9 ((....(((.((.(((((((((((((...(((((((..((.((((((.((((.....)))).)))))).)).)))))))...))))))))))))).)).))).....)) 
ptr ----------------------------------------------------------------------------------------------------------------                      
ggo --GCUUUUAUAUUGUAGGUUUUUGCUCAUGCACCAUGGUUGUCUGAGCAUGCAGCAUGCUUGUCUGCUCAUACCCCAUGGUUUCUGAGCAGGAACCUUCAUUGUCUACUGC-              ENSEMBL X:150717551-150717660(-)          -44.9 ((....(((.((.(((((((((((((...(((((((..((.((((((.((((.....)))).)))))).)).)))))))...))))))))))))).)).))).....)) 
ppy --GCUUUUAUACUGUAGGUUUUUGCUCAUGCACCAUGGUUGUCUGAGCAUGCAGCAUGCUUGUCUGCUCAUACCCCAUGGUUUCUGAGCAGGAACCUUCAUUGUCUACUGC- miRbase UCSC ENSEMBL X:152525486-152525594(-)          -44.4 ((....(((.((.(((((((((((((...(((((((..((.((((((.((((.....)))).)))))).)).)))))))...))))))))))))).)).))).....)) 
mml --GCUUUUAUAUUGUAGGUUUUUGCUCAUGCACCAUGGUUGUCUGAGCAUGCAGCAUGCUUGUCUGCUCAUACCCCAUGGUUUCUGAGCAGGAAUCUUCAUUGUCUACUGCU miRbase UCSC ENSEMBL X:150474738-150474847(-)          -43.5 ((....(((.((.(((((((((((((...(((((((..((.((((((.((((.....)))).)))))).)).)))))))...))))))))))))).)).))).....)).
cja --GCUUUUGUAUUAUAGGUUUUUGCUCAUGCACCAUGGUUGUCUGAGCAUGCAGCAUGCUUGUCUGCUCAUACCCCAUGGUUUCUGAGCAGGAAUCUUCAUUGUCUACUGC-              ENSEMBL Contig287:272186-272295(+)        -39.8 ((...........(((((((((((((...(((((((..((.((((((.((((.....)))).)))))).)).)))))))...)))))))))))))............)) 
tsy CCGUUUUUAUAUUAUAGAUUUUUGCUCAUGCACCAUGGUUGUCUGAGCAUGCAGCAUGUUUGUCUGCUCAUACCCCAUGGUUUCUGAGCAGGAACCUUCAUUGCCUACAG--              ENSEMBL scaffold_384115:343-453(-)        -35.55 ..((...........((.((((((((((...(((((((..((.((((((.((((.....)))).)))))).)).)))))))...)))))))))).)).........))..
mmr ----------------------------------------------------------------------------------------------------------------                      
oga ----------------------------------------------------------------------------------------------------------------                      
tbe -----------UUGUAGGUUUUUGCUCAUGCACCAUGGUUGUCUGAGCAUGCAGUGUGUUUGUCUGCUCAUUCCCCAUGGUUCCCGAGCAGGAACCUU--------------              ENSEMBL scaffold_89044:168-255(-)         -39.3            ....((((((((((((....(((((((.....((((((.((((.....)))).))))))....)))))))....)))))))))))).            
cpo --------------UAGGCUUUUGCUCAUGCACCAUGGUUGUCUGAGCACGCAGCAUGCUUGUCUGCUCAUACCCCAUGGUUCCUGAGCAGGAACCUUCACUGCCUACU---         UCSC ENSEMBL scaffold_197:746457-746552(+)     -38.5        ((((((((((((((...(((((((..((.((((((.((((.....)))).)))))).)).)))))))...))))))))).........)))))..        
dor ------------UGUAGGUUUUUGCUCAUGCACCAUGGUUGUCUGAGCACGCAGCAUGUUUGUCUGCUCAUACGCCAUGGUUCCUGAGCAGGAACCUUAAUUGUCUACUGC-              ENSEMBL GeneScaffold_113:167589-167688(-) -44.3      ...(((((((((((((...((((((((.((.((((((.((((.....)))).)))))).))))))))))...)))))))))))))..............      
mmu ----AGAAUCCAUAUAGGUUUUUACUCAUGCACCAUGGUUGUCUGAGCACAUAACAUGCUUGUCUGCUCAUACCCUAUGGUUCCUGAAGAGGAAUCUUAACUGUCUACUGC- miRbase UCSC ENSEMBL X:69835327-69835433(-)            -27.44  (((........((((((((..(((...(((((((..((.((((((.((((.....)))).)))))).)).)))))))...)))..))))))))......))).....  
rno ----------------------------------------------------------------------------------------------------------------                      
str --------------UAGGUUUUUGCUUAUGCACCAUGGUUGUCUGAGCAUGCAGCAUGCUUGUCUGCUCAUACGCCAUGGUUCCUGAGCAGGAGCCUUCAUUAACUACUGC-              ENSEMBL scaffold_158379:3354-3451(-)      -42.1       .(((((((((((((...((((((((.((.((((((.((((.....)))).)))))).))))))))))...)))))))))))))..............       
opr ----------------------------------------------------------------------------------------------------------------                      
ocu --------------UAGGUUUUUGCUCAUGCACCAUGGUUGUCUGAGCAUGCAGCAUGCUUGUCUGCUCAUACACCAUGGUUCCUGAGCAGGAAUCUUCAUUGCCUACUGC-              ENSEMBL scaffold_106:389183-389280(+)     -42.1       .(((((((((((((...((((((((.((.((((((.((((.....)))).)))))).))))))))))...)))))))))))))..............       
bta -----UUUGUAUUAUAGGUUUUUGCUCAUGCACCAUGGUUGUCUGAGCAUGCAGCAUGCUUGUCUGCUCAUACCCCAUGGUUCCUGAGCAGGAACCGUCACUGCUUACUG-- miRbase UCSC ENSEMBL X:22161601-22161705(-)            -42.7   ...(((.....((((((((((((...(((((((..((.((((((.((((.....)))).)))))).)).)))))))...)))))))))))).....)))......   
ttr ----UUUUGUAUUAUAGGUUUUUGCUCAUGCACCAUGCUUGUCUGACCAUGCAGCAUGCUUGUCUGCUCAUACUCCAUGGUUCCUGAGCAGGAAC-----------------              ENSEMBL scaffold_103722:13254-13345(-)    -29.1          .............(((((((((((...((((((...((.(((....((((((....)).))))))).))..))))))...)))))))))))          
vpa --GCUUUUGUAUUAUAGAUUUCUGCUUAUGCACCAUGGUUGUCUGAACAUACAGCAUGCUUGUCUGCUCAUACCCCAUGGUUCCUGAGCAGAAACCUUUAUUG---------              ENSEMBL scaffold_3932:5889-5990(-)        -29.6     ..........((.((.((((((((((...(((((((..((.(((.((.((((.....)))).)).))).)).)))))))...)))))))))).)).))...     
ssc ----------------------------------------------------------------------------------------------------------------                      
cfa ----------------------------------------------------------------------------------------------------------------                      
fca --GCUUUUAUAUGCUAGGUUUUUGCUCAUGCACCAUGGUUGUCUGAGCAUGCAACAUGCUUGUGUGCUCAUACCCCAUGGUUCCUGAGCAGAAAACUUCAUUGCC-------              ENSEMBL scaffold_205154:3273-3376(-)      -40.4    ((......(((..((.((((((((((...(((((((..((.(((((((((((.....))))))))))).)).)))))))...)))))))))).)).))).)).    
eca --GCUUUUGUAUUAUAGGUUUUUGCUCAUGCACCAUGGUUGUCUGAGCAUGCAGCAUGCUUGUCUGCUCAUACUCCAUGGUUCCUGAGCAGGAACCUUCAUUGCCUACUG-- miRbase UCSC ENSEMBL X:120988447-120988554(-)          -45.2  ......(((....(((((((((((((...(((((((..((.((((((.((((.....)))).)))))).)).)))))))...)))))))))))))....)))...... 
mlu ----------------------------------------------------------------------------------------------------------------                      
pva ----------------------------------------------------------------------------------------------------------------                      
eeu ----------------GGUUUUUGCUCCUGCACCAUGGUUGUCUGAGCACGGAGCAUGCUUGUCUGCUCAUACGCCAUGGUUCGUGAGCAGGAACCU---------------              ENSEMBL scaffold_358034:9325-9406(-)      -42.5               (((((((((((.((.((((((((.((.((((((..(((....)))...)))))).)))))))))).)).))))))))))).               
sar ----------------------------------------------------------------------------------------------------------------                      
cho ----------------------------------------------------------------------------------------------------------------                      
ete ----------------------------------------------------------------------------------------------------------------                      
laf ----------------------------------------------------------------------------------------------------------------                      
pca ----------------------------------------------------------------------------------------------------------------                      
meu ----------------------------------------------------------------------------------------------------------------                      
mdo ----------------------------------------------------------------------------------------------------------------                      
oan ----------------------------------------------------------------------------------------------------------------                      
gga ----------------------------------------------------------------------------------------------------------------                      
mga ----------------------------------------------------------------------------------------------------------------                      
tgu ----------------------------------------------------------------------------------------------------------------                      
aca ----------------------------------------------------------------------------------------------------------------                      
xtr ----------------------------------------------------------------------------------------------------------------                      
dre ----------------------------------------------------------------------------------------------------------------                      
gac ----------------------------------------------------------------------------------------------------------------                      
ola ----------------------------------------------------------------------------------------------------------------                      
tru ----------------------------------------------------------------------------------------------------------------                      
tni ----------------------------------------------------------------------------------------------------------------                      
cin ----------------------------------------------------------------------------------------------------------------                      
csa ----------------------------------------------------------------------------------------------------------------                      
dme ----------------------------------------------------------------------------------------------------------------                      
cel ----------------------------------------------------------------------------------------------------------------                      
                    *  ** * **  ********* ******** **   *   ** **** ******* * * ******   **  ** *                   
                  *** ******** ******************* **   * **** ************** ******** ******** ** *                
                  *********************************** ******** ************** ******** *********** ***              
                  *********************************** *********************** ******** *********** *** * *          
                  *********************************************************** ******** *********** *** * **         
                * *********************************************************** ******** *************** * ** ****    
                * ***************************************************************************************** ******  
         *** **** ***************************************************************************************** ******  
        **** **** ***************************************************************************************** ******  
      * **** **** ***************************************************************************************** ******* 
      ****** **** ***************************************************************************************** ******* 
      ****** ****************************************************************************************************** 
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