Cluster #0, n=152
-3	..ATAAATCA	3900	186	-941.8	3940/3943
-4	.CATAAATC	2943	98	-751.9	2837/2837
-4	.AATAAATC	2519	231	-499.9	2529/2530
-2	...TAAATCAC	2028	103	-474.8	1940/1944
-3	..ATAAATCT	2300	213	-453.9	2362/2363
-2	...TAAATCAA	1840	165	-365.9	1897/1931
-2	...TAAATCAT	1702	145	-344.2	1781/1789
-3	..GTAAATCA	1404	65	-333.9	1351/1355
-2	...TAAATCAG	1582	127	-326.1	1565/1573
-5	CCATAAAT	1503	109	-319.7	911/922
-4	.TATAAATC	1332	121	-262.8	1461/1464
-3	..ATCAATCA	1185	93	-245.6	1273/1350
-4	.TGTAAATC	1185	97	-242.2	1178/1179
-3	..ATAAATCC	1150	104	-227.1	1140/1141
-2	...TAAATCTT	1321	192	-211.1	1456/1458
-5	TCATAAAT	1234	161	-208.6	858/880
-5	CAATAAAT	1326	206	-204.1	831/846
-4	.CATCAATC	910	56	-202.3	884/890
-2	...TAAATCTC	1037	125	-182.0	1059/1060
-4	.AGTAAATC	839	61	-178.0	858/859
-1	....AAATCAAT	1160	185	-175.7	520/771
-4	.CATTAATC	882	79	-174.7	855/866
-2	...TAAATCTG	1008	128	-172.6	999/1006
-5	CAATCAAT	859	83	-165.5	257/450
-4	.GATAAATC	826	77	-161.3	822/822
-4	.AATCAATC	832	80	-160.6	766/914
-3	..TTAAATCA	1118	197	-159.0	1110/1139
-3	..ATTAATCA	897	117	-151.6	866/950
-5	ACATAAAT	1119	213	-151.0	726/740
-3	..GTAAATCT	774	75	-149.0	800/800
-2	...TAAATCCT	898	122	-148.7	854/859
-3	..ATGAATCA	827	98	-146.3	792/820
-3	..CTAAATCA	723	87	-127.1	784/804
-5	CTATAAAT	886	170	-118.9	583/588
-3	..ATCAATCT	578	57	-110.8	584/612
-2	...TCAATCAC	528	48	-104.5	393/398
-1	....AAATCACT	840	181	-103.4	667/674
-5	CCATCAAT	569	67	-101.3	349/363
-5	CTGTAAAT	731	146	-95.5	480/488
-1	....AAATCACA	866	217	-93.5	693/698
-5	CAGTAAAT	695	139	-90.7	409/421
-4	.CGTAAATC	333	10	-86.3	281/283
-5	CCATTAAT	534	77	-86.1	286/300
-2	...TCAATCAA	583	101	-84.2	421/524
-1	....AAATCACC	576	98	-84.2	465/467
-2	...TAAATCCA	562	102	-78.8	544/546
-1	....AAATCATG	600	133	-72.4	513/521
-5	TAATAAAT	886	292	-70.9	591/605
-1	....AAATCATT	735	216	-67.6	638/650
-1	....AAATCAAG	648	169	-67.6	527/534
-5	GCATAAAT	497	108	-61.2	342/349
-4	.CATGAATC	424	76	-60.3	340/347
0	.....AATCACAG	548	138	-59.3	356/371
-4	.ATTAAATC	542	135	-59.2	566/572
-4	.CTTAAATC	458	94	-59.1	490/497
-4	.ACTAAATC	389	66	-57.4	362/370
-3	..GTAAATCC	347	50	-56.5	329/329
-2	...TAAATCTA	493	117	-56.4	519/520
-5	TAATCAAT	412	80	-55.5	178/247
-1	....AAATCAGC	440	100	-52.4	356/359
-2	...TTAATCAC	416	91	-51.2	253/281
0	.....AATCACTC	387	79	-50.3	226/234
-5	TCATCAAT	397	84	-50.2	213/240
-5	AGATAAAT	598	191	-50.1	336/351
-1	....AAATCAGG	492	134	-49.4	394/401
-3	..ATTAATCT	435	105	-49.2	407/443
-3	..ATCAATCC	304	46	-48.3	256/283
0	.....AATCACTG	459	122	-47.4	285/295
-2	...TCAATCAT	371	78	-47.2	323/339
-4	.AATGAATC	393	94	-44.9	347/359
-1	....AAATCATC	443	121	-44.5	396/401
-4	.CCTAAATC	308	55	-44.3	331/338
0	.....AATCACTT	447	124	-44.2	296/308
-5	TCATTAAT	503	155	-44.2	270/304
-2	...TGAATCAC	335	68	-43.9	217/224
-5	TGATAAAT	516	164	-43.7	283/291
-2	...TAAATCCC	354	78	-43.5	345/347
0	.....AATCACCA	391	97	-43.3	253/259
-4	.TCTAAATC	358	83	-42.2	395/403
-2	...TCAATCAG	348	79	-41.8	278/300
-4	.TATCAATC	281	48	-41.7	337/339
0	.....AATCACCC	316	65	-41.1	178/187
-4	.GGTAAATC	229	28	-41.0	229/230
-3	..ATAAATCG	219	25	-40.5	205/205
-1	....AAATCAGT	436	130	-39.9	357/361
-5	CCGTAAAT	178	13	-39.0	89/90
-5	ACATCAAT	331	77	-39.0	189/200
-5	CACTAAAT	340	85	-37.5	190/198
-5	TCGTAAAT	171	13	-37.1	96/100
-1	....AAATCACG	187	19	-36.5	115/117
-1	....AAATCTTC	382	110	-36.5	355/360
-3	..CTAAATCT	355	97	-35.9	355/361
-5	GTGTAAAT	326	87	-33.9	203/208
-1	....CAATCACT	291	69	-33.9	143/146
-1	....AAATCAAC	360	106	-33.7	316/318
-1	....AAATCTCC	370	112	-33.5	312/315
-2	...TTAATCAA	353	106	-32.3	202/277
-4	.AATTAATC	335	100	-31.0	319/331
-4	.GTTAAATC	246	55	-30.3	226/227
0	.....AATCATGT	328	99	-30.0	226/228
-1	....AAATCTTG	342	107	-29.9	301/307
0	.....AATCATTA	352	113	-29.8	181/212
-2	...TGAATCAT	327	101	-29.1	231/239
-2	...TCAATCTG	252	63	-28.2	170/182
-5	GCATCAAT	234	55	-27.7	133/136
-5	GAATCAAT	269	74	-27.4	94/163
0	.....AATCATTC	308	96	-27.2	226/231
-2	...TTAATCAG	278	80	-27.0	186/210
0	.....AATCATCC	246	63	-27.0	172/176
-4	.GATCAATC	155	21	-26.9	169/170
-2	...TAAATCGT	129	13	-25.8	115/116
-2	...TCAATCTT	248	70	-24.7	212/221
0	.....AATCACGG	124	13	-24.5	63/63
0	.....AATCACCT	239	66	-24.4	182/185
-4	.GCTAAATC	193	45	-23.3	189/194
0	.....AATCAAGG	267	85	-23.2	189/194
0	.....AATCAAGC	230	66	-22.6	167/173
-3	..GTCAATCA	223	64	-22.0	175/208
0	.....AATCAGCC	221	63	-21.9	160/164
0	.....AATCACGC	86	5	-21.0	47/47
-5	CTATCAAT	214	62	-20.9	158/166
0	.....AATCAGTC	213	62	-20.7	134/138
0	.....AATCAGGC	211	61	-20.7	140/141
-3	..ATTAATCC	214	63	-20.6	167/190
0	.....AATCAGCT	237	79	-19.6	153/159
0	.....AATCATGC	224	72	-19.4	162/163
0	.....AATCACCG	104	17	-16.8	66/66
0	.....AATCAACC	177	56	-15.9	118/123
-1	....CAATCAGC	166	53	-14.9	77/88
-1	....CAATCATC	148	46	-13.8	74/83
-5	CGATAAAT	71	10	-12.9	54/54
-4	.AGTCAATC	136	42	-12.9	92/114
-4	.GATTAATC	102	24	-12.9	103/208
-3	..GTAAATCG	62	7	-12.7	66/66
-5	ACGTAAAT	84	16	-12.6	57/61
-3	..ATCAATCG	72	11	-12.5	44/58
-2	...TAAATCGA	68	11	-11.6	67/67
-2	...TAAATCGC	81	18	-11.0	75/76
-2	...TAAATCCG	61	10	-10.4	54/54
-3	..ATTAATCG	59	12	-8.9	39/44
-4	.CGTCAATC	39	4	-8.8	38/41
-5	GCGTAAAT	55	11	-8.5	38/38
-1	....AAATCGTG	56	12	-8.2	41/41
0	.....AATCATCG	50	10	-7.8	37/38
0	.....AATCACGA	53	14	-6.7	35/37
-1	....AAATCTCG	52	14	-6.4	48/48
1	......ATCACTCG	39	8	-6.3	19/20
-5	CGGTAAAT	41	12	-5.0	22/22
-5	CGATCAAT	39	11	-4.9	20/22
-1	....AAATCGTA	37	10	-4.9	23/24
-1	....AAATCGAG	39	13	-4.2	20/23
-1	....AAATCGAT	35	11	-4.1	15/19
Cluster #1, n=73
-5	.GATTTATG	2943	98	-751.9	2342/2360
-6	AGATTTAT	2300	213	-453.9	1148/1179
-4	..ATTTATGG	1503	109	-319.7	1311/1311
-6	GGATTTAT	1150	104	-227.1	620/645
-4	..ATTTATGA	1234	161	-208.6	1129/1137
-3	...TTTATGGC	1031	92	-204.5	865/869
-4	..ATTTATTG	1326	206	-204.1	1219/1222
-3	...TTTATTGC	1015	135	-169.8	844/852
-4	..ATTTATGT	1119	213	-151.0	976/982
-4	..ATTTATAG	886	170	-118.9	753/761
-4	..TTTTATGG	828	163	-109.2	735/737
-3	...TTTATGGG	675	99	-107.5	622/625
-3	...TTTATGGT	689	106	-106.8	572/573
-3	...TTAATGGC	561	81	-90.3	456/460
-3	...TTTATGAC	618	107	-89.2	571/575
-3	...TTTATAGC	615	111	-86.4	495/504
-4	..ATTAATGG	534	77	-86.1	479/486
-3	...TTTATGAG	649	131	-84.2	588/596
-2	....TTATGGCC	435	46	-81.4	344/349
-2	....TTATTGCC	455	67	-72.7	277/285
-5	.AATTTATG	623	144	-72.6	452/454
-2	....TTATGGCT	524	99	-71.5	413/417
-4	..TTTAATGG	548	135	-60.5	467/475
-3	...TTTATGGA	552	140	-59.3	520/520
-3	...TTTATGTG	701	224	-58.5	569/572
-3	...TTTATGTC	518	128	-57.1	452/458
-3	...TTTATTGA	663	209	-56.3	665/672
-5	.GTTTTATG	505	137	-50.9	415/421
-3	...TTTATTGG	448	110	-49.8	421/422
-2	....TTATTGAT	487	132	-49.2	254/266
-5	.CTTTTATG	484	138	-46.4	292/296
-3	...TTTATGAT	532	167	-45.7	441/447
-2	....TTATGGTC	302	54	-43.4	186/190
-4	..CTTTATGG	361	83	-42.8	299/299
-3	...TTAATGGG	373	89	-42.8	319/326
-2	....TTATGGGC	273	43	-42.6	230/236
-2	....TTATTGCT	486	159	-39.8	325/333
-2	....TTATGACC	270	48	-39.1	185/190
-4	..CTTTATTG	419	125	-38.4	368/373
-2	....TTATTGCA	340	85	-37.5	203/211
-2	....TTATGGTG	299	65	-37.4	228/231
-3	...TTAATGGT	335	84	-36.9	288/292
-2	....TTATGGCA	286	62	-35.9	238/241
-2	....TTATAGCC	276	60	-34.6	155/163
-3	...TTAATGGA	366	108	-34.1	321/326
-2	....TTATGACT	327	88	-33.7	226/230
-4	..GTTAATGG	269	64	-31.3	202/204
-2	....TTATGGAG	293	77	-31.1	230/232
-3	...TTAATTGC	333	102	-29.9	252/268
-2	....TTATGAGC	255	61	-29.7	174/181
-3	...TTTATAGG	326	99	-29.6	256/263
-4	..GTTTATGG	281	81	-27.2	244/245
-1	.....TATGGCCT	232	56	-26.9	119/123
-4	..CTTAATGG	272	77	-26.9	233/235
-5	.CATTAATG	220	51	-26.5	69/138
-2	....TTATTGTC	302	100	-24.8	153/156
-2	....TTATGTCC	239	65	-24.8	146/152
-2	....TTATGATG	260	77	-24.5	147/149
-2	....TTATAGCT	289	96	-23.7	176/181
-1	.....TATGGCTG	256	78	-23.4	132/137
-1	.....TATGGCCA	220	59	-23.2	108/115
-1	.....TATGGCCC	170	35	-22.8	90/96
-2	....TTATGGGG	216	59	-22.4	181/185
-2	....TTATTGGC	222	63	-22.1	130/131
-2	....TTATGGGT	206	56	-21.5	196/197
-2	....TTATGAGG	228	72	-20.2	159/161
-2	....TTATTGAC	232	76	-19.6	124/128
-2	....TTATGGAC	186	51	-19.4	145/147
-2	....TTATGGCG	83	9	-16.7	52/54
-2	....TTATAGGC	173	54	-15.8	88/93
-1	.....TATGGGCC	111	34	-10.8	57/63
-2	....TTATTGCG	52	14	-6.4	28/29
-2	....TTATGACG	41	10	-5.8	27/27
Cluster #2, n=21
-4	TTAATGGC	561	81	-90.3	503/503
-3	.TAATGGCC	395	57	-64.0	288/291
-3	.TAATGGCT	458	88	-62.0	400/403
-4	CTAATGGC	279	47	-41.8	209/212
-2	..AATGGCTG	393	107	-39.8	322/326
-3	.TAATTGCC	267	47	-39.0	221/230
-3	.TAATGGCA	366	97	-38.1	294/295
-2	..AATGGCCT	333	93	-33.1	275/275
-4	TTAATTGC	333	102	-29.9	311/318
-4	GTAATGGC	177	41	-21.6	133/133
-2	..AATGGCCC	220	65	-21.0	181/181
-4	ATAATGGC	242	80	-20.2	171/173
-4	TGAATGGC	227	75	-19.0	186/187
-2	..AATTGCCC	175	47	-18.7	129/131
-4	TCAATGGC	203	66	-17.5	160/160
-1	...ATGGCCAT	167	50	-16.1	69/138
-4	CTAATTGC	162	48	-15.8	129/131
-4	GTAATTGC	158	46	-15.7	124/126
-3	.TAATGGCG	54	11	-8.2	42/42
-2	..AATGGCCG	53	11	-8.0	47/47
-4	CGAATGGC	38	11	-4.7	32/33
Cluster #3, n=42
-6	.TGATTGAT	1185	93	-245.6	688/954
-5	..GATTGATG	910	56	-202.3	496/601
-4	...ATTGATTT	1160	185	-175.7	1190/1210
-4	...ATTGATTG	859	83	-165.5	997/1058
-5	..GATTGATT	832	80	-160.6	838/953
-5	..TATTGATT	771	127	-114.6	858/866
-6	.AGATTGAT	578	57	-110.8	369/370
-7	GTGATTGA	528	48	-104.5	190/365
-4	...AGTGATTT	840	181	-103.4	790/794
-4	...ATTGATGG	569	67	-101.3	486/504
-3	....TTGATTGA	583	101	-84.2	373/542
-5	..CATTGATT	558	96	-81.0	584/585
-5	..AATTGATT	519	129	-56.9	572/575
-4	...ATTGATTA	412	80	-55.5	414/448
-5	..GAGTGATT	387	79	-50.3	264/280
-6	.TTATTGAT	487	132	-49.2	324/340
-6	.GGATTGAT	304	46	-48.3	219/220
-5	..CAGTGATT	459	122	-47.4	301/318
-7	ATGATTGA	371	78	-47.2	186/189
-5	..AAGTGATT	447	124	-44.2	336/347
-7	CTGATTGA	348	79	-41.8	182/186
-3	....TTGATTGC	308	62	-40.8	244/251
-6	.CTATTGAT	314	66	-40.2	214/214
-4	...ATTGATGT	331	77	-39.0	303/334
-4	...AGTGATTG	291	69	-33.9	253/303
-6	.GTATTGAT	246	52	-31.7	189/189
-6	.CCATTGAT	228	45	-31.0	148/148
-4	...ATTGATTC	269	74	-27.4	289/304
-3	....TTGATGGC	279	80	-27.2	169/175
-3	....TTGATTGT	282	82	-27.0	239/241
-7	AAGATTGA	248	70	-24.7	127/127
-3	....TTGATTGG	243	70	-23.7	206/212
-6	.TCATTGAT	275	88	-23.7	179/180
-2	.....TGATTGAC	223	64	-22.0	101/128
-6	.GAATTGAT	225	75	-18.7	132/134
-6	.GCATTGAT	193	57	-18.6	145/148
-4	...ATTGACTG	202	65	-17.6	166/184
-5	..TATTGACT	198	66	-16.6	128/131
-4	...GTTGATTG	162	46	-16.5	99/139
-5	..GATTGACT	136	42	-12.9	52/91
-6	.CGATTGAT	72	11	-12.5	49/49
-7	TCAATTGA	86	28	-8.1	41/82
Cluster #4, n=15
-3	.GTCATTAA	501	93	-69.3	427/428
-4	GGTCATTA	335	54	-51.2	265/266
-2	..ACATTAAT	471	133	-45.7	240/272
-2	..TCATTAAT	503	155	-44.2	391/409
-3	.GACATTAA	382	109	-36.9	296/311
-3	.CTCATTAA	405	135	-32.6	391/394
-4	AATCATTA	352	113	-29.8	357/363
-1	...CATTAATG	220	51	-26.5	95/190
-4	AGTCATTA	285	86	-26.2	285/285
-4	CCTCATTA	259	72	-26.1	231/232
-2	..TCATTAGG	202	45	-25.2	117/118
-3	.GTCATTAG	193	50	-21.2	175/175
-4	CGTCATTA	76	17	-10.3	52/52
-3	.GTCGTTAA	49	7	-9.3	42/44
-4	CGACATTA	35	7	-5.9	34/34
Cluster #5, n=19
-4	TTTACAGC	533	97	-74.6	462/462
-4	TTTACTGC	514	102	-67.8	485/485
-3	.TTACAGCC	356	79	-43.5	268/268
-3	.TTACTGCT	365	110	-33.3	333/333
-4	TTTACAAC	332	92	-33.2	293/293
-3	.TTACTGCC	274	79	-26.5	255/255
-4	TTAACTGC	268	77	-26.1	249/252
-4	TTTACGGC	119	14	-22.5	95/95
-4	ATTACTGC	221	68	-20.2	150/151
-4	TTAACAGC	226	72	-19.8	194/196
-3	.TAACTGCC	176	51	-17.5	167/169
-4	TTTACTAC	183	60	-15.8	164/165
-3	.TTACGGCC	61	9	-11.0	51/51
-3	.TTACGGCT	65	12	-10.3	54/54
-4	TTAACGGC	59	13	-8.4	52/54
-3	.TTACGGCA	47	8	-8.2	39/39
-2	..TACGGCTG	41	8	-6.7	19/21
-3	.TTACTGCG	37	10	-4.9	38/38
-3	.TAACGGCA	41	13	-4.6	37/39