I have recently joined the Department of Computer Science, State University of New York at Stony Brook,
as an Assistant Professor.
At MIT, I am affiliated with the SuperTech Research Group
led by Professor Charles Leiserson.
Click here for my UT Austin homepage
(with a list of my publications and other relevant information).
Research Interests
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Design and analysis of algorithms and data structures for combinatorial problems,
especially,
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Algorithms for massive datasets: external-memory,
cache-oblivious, streaming, parallel, etc.
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Algorithms for multicore computing.
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Graph algorithms: static and dynamic, exact and approximate, etc.
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Computational Biology and Bioinformatics
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structure-based drug design, protein-protein docking, protein flexibility, energetics, sequence alignment, etc.
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Experimental algorithmics.
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Contact: shaikat AT csail DOT mit DOT edu, rezaul AT mit DOT edu
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