hsa-mir-1229 GTGGGTAG-GGT-------------TTGGGGG--------A--------------G-AGCG--------------------------------------TGGG--CTGGGGTTCAG----GGACACC-CTCTCACCA-CTGCCC-----TC---CCA----CAG
hsa-mir-1229 (((((.((-(((-------------.(((..(--------(--------------(-((.(--------------------------------------((..--(((.....)))----...))).-))))).)))-..))))-----))---)))----)..
human ········-···-------------·······--------·--------------·-····--------------------------------------····--···········----·······-·•••••••·-······-----··---···----··· hsa-mir-1229 [cloned]
chimp ········-···-------------·······--------·--------------·-····--------------------------------------····--·········G·----·······-·•••••G•G-······-----··---··C----···
gorilla ········-···-------------·······--------·--------------·-····--------------------------------------····--·········G·----·······-·•••••G•G-······-----··---··C----···
orangutan ········-···-------------·······--------·--------------·-····--------------------------------------····--·········G·----·······-·•••••G•G-······-----··---··C----···
rhesus ········-··G------------GC······--------·--------------·-··T·--------------------------------------····--·········G·----·······-·•••••G•G-······-----··---··C----···
marmoset ········-··G-------------C······--------·--------------·-····--------------------------------------····--···C·······----·······-·•••••G•·-······-----··---··C----···
tarsier --------------------------------------------------------------------------------------------------------------------------------------------------------------------
bushbaby ···A····-··G--------------······--------·--------------·-···T--TGTGCTGGGCTGAGCA-GGCAGTCCCT------GTT·A··--····T···TG·C---·······-·••C••G•·-·····T-----··---··C----···
mouseLemur ···A··G·-·AA--------------C····---------·--------------·-···A--GATGCTGGGCTGAGCA-GGCAGGCCCT------GTT····--········TG·----·······-·•••••G•·-······-----··---··C----···
treeShrew --------------------------------------------------------------------------------------------------------------------------------------------------------------------
guineaPig ···A·CGT-T·C----------------------------·--------------·-G··CCAGTGGGTGCATTGTGCA----GGGTC--------AGG····--AGCCCAGG·C·----CCTGG··T·•••G•G•T-·CTTG·AACCTC·---·TG----···
kangarooRat ···A·CG·-·---------------------------------------------·-···C---AGGCTAGGCTGAGCCACACAGGCC--------GTT····--··A··TG··T·----TTTTG··-AA••G•AA·-·CTTT·-----··ATCT·G----···
mouse ···A····-··C-------------------------------------------·-G··C---TGTGTGGGCTGGGCT------------------TT····--TGTT·C··TC·----T·TTTA·-A•••AGG•·-·C··G·-----··---···----···
rat ···A····-··C----------------------------·--------------·-G··C---TGTGTGGGCTGGGCT------------------TT····--TGTT·T·GTT·GG--T·TTTA·-A•••AGG•·-····G·-----··---···----···
squirrel ···A···A-A·G----------------------------·CAGTGGGGTCTGGG·-G··CATCTGGCTGGGCTGAAACATGCAGGCCCTGTTTAGGGC··A·--TGTTA·G·TTTGGCAT·TTTA·-T•••••G•·-·····T-----··---··C----T··
pika --------------------------------------------------------------------------------------------------------------------------------------------------------------------
rabbit -------------------------------------------------------·-C··C-----------------------------------------------------------TCC·CT·--------------··T-----G·---TG·----T··
alpaca ···A···AG··GCAGTCAGGTGGAGG······--------GA-------------·-··GC-------TGGAC--------------------------··AC--·AA····CTT·----··G··A·-·•••••TTG-·····T-----··---··C----···
cow ···A··GAG··GCTACGGAGCGGAGG······CGAGGCTCGA-------------T-GAGC---------------------------------------------A···C·CTT·----··G·CA·-·••••••TG-····G·-----··---··C----···
dolphin ···A··GAG··GCAGTCAAGTGGAGC··A···--------GA-------------·-··GC---------------------------------------------A··A··CTT·----·····A·-·•••••TTG-····A·-----··---··C----···
cat ···A··G·A··G--GGCAGGTGGAGG·····------------------------·-CAGT-------AGGCT---------------------------AA·--T······CTG·----A·G··AT-·•••••G•G-······-----··---··T----···
dog ···A··G·G··GCAGGCAGGTGGACA··A··A--------GTG------------·-··GC-------AGGGC---------------------------·A·--·A·A···CTG·----··G··GT-GG••••GTG-······-----··---··TTCCT···
horse ···A··G·-···CAGGCCCGCAGAGG··T···--------·--------------·-··GC-------TGGGC---------------------------·A---·A·····CTT·----····GG·-·•••••G•G-······-----··---··C----···
megabat ···A··GC-T··T-GGCAGGCAGAGG··T···--------G--------------AC··GC-------TGGAC--------------------------··A·--·AA··ACCTG·----··GT·AG-·•••••GTG-·C····-----··---··C----···
microbat ···A··G·-···CCGGCGGGCAGAGG······--------G--------------·-··GC-------TGGGC--------------------------··A·--·A·····CTT·----····GAG-T•••••G•·-·····G-----··---··C-----··
hedgehog --------------------------------------------------------------------------------------------------------------------------------------------------------------------
shrew ···A··T·g···-----gggcgagggc····a-----------------------·-g·gc-------agggg--------------------------g·aagcgg··a·gcTCA----AACTGGG-·•G••------C···T-----··---··C----···
armadillo --------------------------------------------------------------------------------------------------------------------------------------------------------------------
sloth --------------------------------------------------------------------------------------------------------------------------------------------------------------------
elephant --------------------------------------------------------------------------------------------------------------------------------------------------------------------
rockHyrax --------------------------------------------------------------------------------------------------------------------------------------------------------------------
tenrec --------------------------------------------------------------------------------------------------------------------------------------------------------------------
opossum --------------------------------------------------------------------------------------------------------------------------------------------------------------------
platypus TC····C·-··C--GATGGGCGACGC··AC-----------------------------------------------------------------------------------G··----·CGGG··-G••C••••GG·C··GA-----AA---TAC----·G·
chicken --------------------------------------------------------------------------------------------------------------------------------------------------------------------
zebraFinch --------------------------------------------------------------------------------------------------------------------------------------------------------------------
lizard --------------------------------------------------------------------------------------------------------------------------------------------------------------------
frog --------------------------------------------------------------------------------------------------------------------------------------------------------------------
fugu --------------------------------------------------------------------------------------------------------------------------------------------------------------------
tetraodon --------------------------------------------------------------------------------------------------------------------------------------------------------------------
medaka --------------------------------------------------------------------------------------------------------------------------------------------------------------------
stickleback --------------------------------------------------------------------------------------------------------------------------------------------------------------------
zebrafish --------------------------------------------------------------------------------------------------------------------------------------------------------------------
lamprey --------------------------------------------------------------------------------------------------------------------------------------------------------------------
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