hsa-mir-1231 GTCAGTGT-------CTGGGCGG--ACAGCT-GCAGGAAAG---GGAAGACC--------AAGG-------CTTGC---TGTCTGTCCAG--TCTGCCACCCTACCCT-G-----T-CTGTTCTTGCCA-------------CAG
hsa-mir-1231 ........-------((((((((--((((..-(((((..((---((.((((.--------.(((-------(....---.)))).....)--)))....))))..)))-)-----)-))))))..))).-------------)))
human ·····•••-------••••····--······-·········---········--------····-------·····---···········--················-·-----·-············-------------··· hsa-mir-1231 [cloned]
chimp -------------------------------------------------------------------------------------------------------------------------------------------------
gorilla -------------------------------------------------------------------------------------------------------------------------------------------------
orangutan -------------------------------------------------------------------------------------------------------------------------------------------------
rhesus ·····CA•-------••••·A··--······-·········---········--------····-------T····---·A-·······A--················-A-----·-·······CA···-------------···
marmoset ·····•A•-------••••·T··--·TG···-A········---······T·--------····-------·····---CA·······CA--C···············-·-----·-············-------------···
tarsier ·····•A•-------A•••····--·G····-·····-···---A·····T·--------····-------···AG---·A·A··A···A-CC···············-·-----·-··········TG-------------···
bushbaby -------------------------------------------------------------------------------------------------------------------------------------------------
mouseLemur ·····•AC-------••••·A··--·G····-······C··---··G····T--------G···-------T····---C·········A-CC·CA·······C····-·-----·C·······C···G-------------···
treeShrew ·····CCC-------•A••CA·-----····-A··A·-CC·---·A··A·GT--------C···-------TC·AT---G··········-CC···TAG··--·····-·-----·-··········TG-------------T··
guineaPig ·····C••--------•A•·--C--·G····-·····G···---··G··C··--------····-------·C··A---GACA······A-CCT·········T····-·-----·-············-------------···
kangarooRat ·····•••-------•C••··AC--·G····-······G··---··G··GT·--------·T··-------·C··A---GC·G·······-CC····G·····G····-·-----·-··C·········-------------···
mouse ·····•••-------••••·--C--·G····-······G··---AAGG·--·--------·G··-------·CG·A---CA···C·G·CA-CC······-···G····-·-----·-·······GC···-------------···
rat ·····•••-------••••·--C--·G····-····A·G··---···G·--·--------·G··-------·C·A·---C····C·G·CA-CC······-···G····-·-----·-G·C····GC···-------------···
squirrel ·····•••-------••••··C·--·G····-A······T·---··G·AGT·--------····-------·C··A---GA··-·····A-CC·····C····T····-·-----·-···········G-------------T··
pika -------------------------------------------------------------------------------------------------------------------------------------------------
rabbit ··TG·C••-------••••·--C--·G··A--···A·G·GA---··G··C·T--------GC··-------·C··A---GAC···C····-CC·····G·········-·-----·-······CCC·A--------------···
alpaca -------------------------------------------------------------------------------------------------------------------------------------------------
cow -------------------------------------------------------------------------------------------------------------------------------------------------
dolphin -------------------------------------------------------------------------------------------------------------------------------------------------
cat ···G·•••-------••••··A·--·G····-·AG·A··G·---·A·GAC·G--------·G·--------··C·A---GA·G······A-CC····A··········-·-----·-·······C····-------------···
dog -------------------------------------------------------------------------------------------------------------------------------------------------
horse ·····•••-------••••··C·--·G····-AGG·A·GGA---·C·G·G··--------····-------··G·G---G·C····-···-CC·····CA··CG···--------·-············-------------···
megabat -------------------------------------------------------------------------------------------------------------------------------------------------
microbat -------------------------------------------------------------------------------------------------------------------------------------------------
hedgehog -------------------------------------------------------------------------------------------------------------------------------------------------
shrew -------------------------------------------------------------------------------------------------------------------------------------------------
armadillo -------------------------------------------------------------------------------------------------------------------------------------------------
sloth -------------------------------------------------------------------------------------------------------------------------------------------------
elephant -------------------------------------------------------------------------------------------------------------------------------------------------
rockHyrax ·····•A•-------T••TA·A·--···T··G····A····---····A···--------····-------···AT---GA····C···A-CCA···A·····G····-·-----·-············-------------···
tenrec ···G·CA•-------•C••··A·--·GG··GG··T······---···G·G··CCCGGCTG·C··-------TC··T---····G·C·TCA-CC·······T··G·T··G·-----·-············-------------T··
opossum ··T··CC•--------A••··A---·G····-·GT····G·----------A--------GT··-------TC··G---GACT··C···ATCC···AAGT···TAA··-·CTGGC·-··C····CC·---------------···
platypus -------------------------------------------------------------------------------------------------------------------------------------------------
chicken -------------------------------------------------------------------------------------------------------------------------------------------------
zebraFinch -------------------------------------------------------------------------------------------------------------------------------------------------
lizard -------------------------------------------------------------------------------------------------------------------------------------------------
frog -------------------------------------------------------------------------------------------------------------------------------------------------
fugu ··TT·AACTTTACCT--------CC·-----AAT···TTT·ATGTT·CA·TA--------G·T·AACACAA····AGGT·TC··T·--------·AAT--------------------------·T··TGCCCATCTTAGTC---
tetraodon -------------------------------------------------------------------------------------------------------------------------------------------------
medaka -------------------------------------------------------------------------------------------------------------------------------------------------
stickleback -------------------------------------------------------------------------------------------------------------------------------------------------
zebrafish -------------------------------------------------------------------------------------------------------------------------------------------------
lamprey -------------------------------------------------------------------------------------------------------------------------------------------------
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