hsa-mir-181d GTCCC----------------------------------CTCCCCTAG------GC-C------------ACAG--------------------CCGAGGTCACAATCAACATTCATTGTTGTCGGTGGGTTGTGAGGAC--TGAGGCCAGACCCACCGGGGGATGAATGTCACTGTGGCTGGGCCAGAC-ACGGCTTAA--GGGGAATGG-----------G---------------GAC
hsa-mir-181d (((((----------------------------------(((((((((------((-(------------...(--------------------((..(((((((....(((((((((.(..((((((((((....((.(--....))).))))))))))).)))))))))...))))))).))).....-..))))).)--)))))..))-----------)---------------)))
human ·····----------------------------------·········------··-·------------····--------------------···············•••••••························--················································-·········--·········-----------·---------------··· hsa-mir-181d [array-cloned]
chimp ·····----------------------------------·········------··-·------------····--------------------···············•••••••························--C···············································-·T·······--·········-----------·---------------··· ptr-mir-181d
gorilla ·····----------------------------------·········------··-·------------····--------------------···············•••••••························--C···············································-·········--·········-----------·---------------···
orangutan C····----------------------------------·········------··-·------------····--------------------··A············•••••••························--C···············································-·········--·········-----------·---------------···
rhesus ·····----------------------------------·········------··-·------------····--------------------··A············•••••••························--C···············································-·········--·········-----------·---------------··· mml-mir-181d
marmoset AC···----------------------------------········A------··-·------------····--------------------··A············•••••••························--C···············································-·T·······--·······A·-----------·---------------···
tarsier -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
bushbaby C··TT----------------------------------T··T·T···------··-·------------····--------------------GGA···CTCA·GG··•••••••························--CA··········································G···-·T···C··C--········A-----------C---------------A·A
mouseLemur -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
treeShrew A---------------------------------------------G·------··-·------------····--------------------·GA············•••••••························--G···C···································A·······G·A···G·G·CT·····CCT·-----------·---------------·GA
guineaPig --···----------------------------------··-------------------------------------------------------A·········C··•••••••··TC····-···············--C·C········T·C·A··················CA·GC···GG-----GG··TG·GT--··CAT---·-----------·---------------···
kangarooRat AGT··----------------------------------·····T·G·------··T·------------C·GT--------------------TGA···········C•••••••························TGG·G·A··········G·AA···················AATA···TT·-C·A··CC··--···A--------------------------------··A
mouse A····----------------------------------··G··TC··------··-·------------····--------------------·AA··········T·•••••••·······················---G·CA·········································A··A··AC·A·C·--···AT---·-----------·---------------··A mmu-mir-181d [cloned]
rat A····----------------------------------··G··TC··------··-·------------····--------------------·AA··········T·•••••••·······················---GA··A········································A··A··A·TC·G·--·A·AT---·-----------·---------------··A rno-mir-181d [cloned]
squirrel A--------------------------------------------C··------··-·------------····--------------------·GA············•••••••·C······················--C···A········································T··-··A··C···GG···AC---C-----------·---------------··A
pika --···----------------------------------AC----------------·------------C·GC--------------------··A··T·········•••••••·······T················--AC················CA····G···C·······A········C---··A··C·GG--·····---A-----------·---------------·GG
rabbit -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
alpaca A····----------------------------------·····T··-------··-·------------····--------------------·GA············•••••••························A-G················A···························T··-··A··GA··--·······-·-----------·---------------··T
cow A····----------------------------------·····T···------··-·------------····--------------------·GA············•••••••··················---···--A···A············A······························-··AATCCTG--·--------------------------------------
dolphin A····----------------------------------·····T···------··-·------------····--------------------·AA············•••••••························--G················A··················T·······G···-··A··C···--·······-·-----------·---------------··T
cat -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dog -····--------------AGATCCGACCTGAGCTTCCT····AT···------··-·------------····--------------------·GA············•••••••························--G················A······························-·TA··C·G·--·······-C-----------·---------------·CT cfa-mir-181d [Solexa]
horse A····TTAGGCCACAGTGAAGGTCACAATCAACATTCATTGTTGTCG·TGGGTT·T-G------------·G··--------------------·GA············•••••••························--G··········································TG···-··A··C·G·--·······-·-----------·---------------··T
megabat A····----------------------------------·····T··A------··-·------------····CGAAGGTCACAGTCATTGTTGGA············•••••••····················A··T--G··-·············A·························TGC··-··A··C···--··C··G·-·-----------·---------------·CT
microbat A····----------------------------------····TT···------··-·------------····--------------------AGA·A··········•••••••························--G················A···························C··-··A··C·G·--·····G·-·-----------·---------------·CT
hedgehog -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
shrew -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
armadillo -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
sloth -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
elephant A·A··---------------------------------C·········------··-·------------····--------------------·GA············•••••••····················A··T--G···············································-·····C·GG--···AT---------------·---------------·GA
rockHyrax A····---------------------------------TG········------··-·------------····--------------------TGA············•••••••·······················T--G···············································-··A··C·TG--···AT---------------·---------------·GA
tenrec ACATA----------------------------------GC·····G·------··-·------------··C·--------------------·AA·A··········•••••••····················A··G--C················AA·····························-···A·C·G·--··A·GG···CGGAGGGACCA·---------------·GA
opossum T····----------------------------------·····TCG·------T·-·TATTGCCCACCT·A·C--------------------·AA············•••••••···C·················AT·--·····AA·A··T·····AT·····························-CT··ACCTG--·A·AGCA··-----------·TTGGATGGCTGCACA·GA
platypus -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
chicken -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
zebraFinch -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
lizard -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
frog -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
fugu -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
tetraodon -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
medaka -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
stickleback -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
zebrafish -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
lamprey -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
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