hsa-mir-431 TCCT-----------GC---TTGTCCTGCG---AGGTGTCTTG-------CAGGCCGTC--------ATGCAGGCCA--CACTGACGGTAACGT-----TGCAGGTCG------TCTTGCAGGGCTTCTCGCAAGACGACATCCTCATCACCAACGACG
hsa-mir-431 ...(-----------(.---(((((.((((---(((.((((((-------((((.((.(--------.((((((((.--.......)))....)-----)))).).))------.)))))))))).))))))).)))))))..................
human ····-----------··---··········---····••••••-------•········--------··········--···············-----·········------············································· hsa-mir-431 [cloned]
chimp ····-----------··---··········---····••••••-------•········--------··········--···············-----·········------············································· ptr-mir-431
gorilla ····-----------··---··········---····••••••-------•········--------··········--···············-----·········------·············································
orangutan ····-----------··---··········---····••••••-------•········--------··········--···············-----·········------·············································
rhesus ····-----------··---··········---····••••••-------•········--------··········--···············-----·········------············································· mml-mir-431
marmoset ····-----------··---··········---····••••••-------•········--------··········--···············-----·········------···································G·········
tarsier ····-----------··---GC········---····••••••-------•········--------··········--···············-----·········------···········G····················G··G·········
bushbaby ····-----------··---·C········---····••••••-------•········--------··········--···············-----·········------·············································
mouseLemur ····-----------··---·C········---····••••••-------•········--------··········--···············-----·········------······································G······
treeShrew ---------------------------------------------------------------------------------------------------------------------------------------------------------------
guineaPig ····-----------··---GC········---····••••••-------•········--------··········--···············-----·········------···································G·········
kangarooRat G···-----------··TGG·C········---····••••••-------•········--------··········--·············T·-----·········------···········C·······················G·········
mouse ····-----------··---GC········---····••••••-------•········--------··········--···············-----·········------·····························T·····C········· mmu-mir-431 [PCR, cloned]
rat ····-----------··---GC········---····••••••-------•········--------··········--···············-----·········------·····························T·····G········· rno-mir-431 [cloned]
squirrel ····-----------··---GC········---····••••••-------•········--------········AC--T·T······G·····-----·········------····························-----------------
pika G··C-----------·T---GC········---····••••••-------•········--------·C········--·T·············-----·········------·····························T·····G·········
rabbit ---------------------------------------------------------------------------------------------------------------------------------------------------------------
alpaca ---------------------------------------------------------------------------------------------------------------------------------------------------------------
cow ····-----------··---GC········---····••••••-------•········--------··········--·········A·····-----·········------····························AT········CT·····
dolphin ····-----------··---·C········---····••••••-------•········--------··········--···············-----·········------···································GT·C······
cat ---------------------------------------------------------------------------------------------------------------------------------------------------------------
dog ····-----------··---·C········---····••••••-------•········--------··········--···············-----·········------·····························T········C······
horse ····-----------··---·C········---····••••••-------•········--------··········--···············-----·········------·····························T···············
megabat G··C-----------··---GC········---····••••••-------•········--------··········--·T···T·········-----·········------···········G············G··---C·GC·G··G······
microbat G···-----------··---GC········---····••••••-------•········--------··········--···············-----·········------···························---···CTC··G·T····
hedgehog ---------------------------------------------------------------------------------------------------------------------------------------------------------------
shrew ---------------------------------------------------------------------------------------------------------------------------------------------------------------
armadillo ---------------------------------------------------------------------------------------------------------------------------------------------------------------
sloth ---------------------------------------------------------------------------------------------------------------------------------------------------------------
elephant ··T·-----------·A---·C··-·····---G···••••••-------•········--------··········--·CT············-----·········------C·C···G·····················T···C··GTT·····T·
rockHyrax ··A·-----------·A---·C········---G···••••••-------•········--------··········--·C·············-----·········------C·C···T·····················T······GTTCGT··T·
tenrec ··T·-----------·G---·C········---G·C·••••••-------•·A······--------··········--·CT············-----·········------C·C···C·························G··GTTC··A·T·
opossum ---------------------------------------------------------------------------------------------------------------------------------------------------------------
platypus ---------------------------------------------------------------------------------------------------------------------------------------------------------------
chicken ---------------------------------------------------------------------------------------------------------------------------------------------------------------
zebraFinch ---------------------------------------------------------------------------------------------------------------------------------------------------------------
lizard ---------------------------------------------------------------------------------------------------------------------------------------------------------------
frog ---------------------------------------------------------------------------------------------------------------------------------------------------------------
fugu G·GCACTGGAAGGGA·A---CA····A·T·---GC·-•AGA••-----GTT···GT··T----GTGGGCAT·TT·T·CC···A----·····tgcttggac··a··g·aggggTGTC··G·T·C·A·GCA··G·ag··c·g··tc····t··tgatt·a
tetraodon ATGC-CTTGAAGGGG·A---CATG··A·AC---GC·------•CAGACAC•··AGAA·T----GACGGA·T·TT···--·C·AAGGCAGG··TG--TGC·C··A·CGCTAGGGT·GCG·GCC·CAACGCAA·GGAG··CAT··TC··GTGT·TGATT··
medaka GGG·-----------·A---G·A·····TA---GA·----••A-----AC•···GAA·TGTGGGAGT·CT·TAC···--TGAGAGTT··G·A·A------C······TTAGGAT······T·CA·A·AG·CTGCAGG···G··TC··GAT··TGATTGT
stickleback ·ggg-----------·a---ga·g··g·t·gacga·----c••-----ac•··tgta·tgtgggcgt·ct·cac···--··t·agtt··ttg·a------c·······acgggtggc··g··ac·a·acac·ggaga····c·tc····t··tggtt·t
zebrafish ---------------------------------------------------------------------------------------------------------------------------------------------------------------
lamprey ---------------------------------------------------------------------------------------------------------------------------------------------------------------
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