hsa-mir-593 CCC-CCAGAA--TCTGT-CAG---GCACCA------------------------GCCAGGCATTGC--T-------------CAGCCCGT------------TTCC----------CTCT---------------------GGGGG--------AGCA-------AGGA----GTGGTGCTGGGT--TTGTCTCTGCTGG-GGTTTCTCCT
hsa-mir-593 .((-((((..--.....-(((---(.((.(------------------------(((.(((((..(--(-------------(.....((------------((((----------(...---------------------.))))--------))).-------..))----)..))))).)))--).)).))))))))-))........
human ···-······--·····-···---······------------------------············--·-------------········------------····----------····---------------------·····--------····-------····----············--··•••••••····-·········· hsa-mir-593 [SAGE, cloned]
chimp ···-······--·····-···---······------------------------············--·-------------······C·------------····----------····---------------------·····--------····-------····----············--··•••••••····-·········· ptr-mir-593
gorilla ···-·T····--·····-···---······------------------------············--·-------------······C·------------····----------····---------------------····A--------····-------····----············--··•••••••····-··········
orangutan ···-·····G--·····-···---···T··------------------------············--·-------------······C·------------····----------····---------------------·····--------····-------····----············--··•••••••····-··········
rhesus ···-·····G--·G···-···---···T··------------------------·········C··--·-------------······C·------------····----------····---------------------·····--------····-------····----············--··•••••••····-·········· mml-mir-593
marmoset ···-·····G--·····-···---·T····------------------------·········CA---·-------------······C·------------····----------····---------------------T·A··--------····-------····----····CA······--··••T••••··A·-··········
tarsier -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
bushbaby ···-·····G--·AC··-···AAA····T·------------------------··TGT··C·G··--·-------------···G··C·------------C···----------···C-------------ATTTCC-AT···A--------··G·-------G···---------···T··C--··••G••••T···-··········
mouseLemur -··-·····G--·····-···GAA······------------------------········GG··TT·-------------······C·------------C···----------···C-----------CAGCTTCC-TT·A··--------··G·-------G··----------······C-----•G••••····-··········
treeShrew ··T-G·CA·G--·T·CG-···-----------------------------------------·G··--A-------------······C·------------C·TT----------···A-------------GTTTCC-TTC·AA--------G···-------G··GCTGG···AGT·····C--··TGT••••····-···C······
guineaPig ···-T··A·GTC·T·A·-···---·A·G··GGGAGCAGATCATCTATA--AATG······A·ACA·--CAGCCAGGATGGTT······CCTCTTCGTCTTCAC·T·----------TCA·---------------------A···A--------G·A·T---GAG·T·T----·G·AGC·····A--··••T•T••····-·······T··
kangarooRat ·T·-TGGT·G--·····-···---·AGG·CAGGAACAAATTGCCTATG--TAGG·T····A·ACA·--·GGCTGGGGCAGCT····----------------C···CTTATACCAGT·GC---------------------A····GGGAGTGC·T··A---GAGG·AT----·G·AGC·····C--·G•CT••••·CT·-·······T··
mouse ·-·-TA·--G--·G···-···---·A·T··TGGAGCAGATTGTCTG-A--TATGAT····GGGCC·--·---------------------------------C·T·----------T·AC---------------------A·A··--------·C··----GAAG··T----ACAAGCT··T------CC••••C··T·A···GGT·T··
rat ·-·-TG·-----·G···-···---·A·T··TGGAGCAGATTGTCTG-A--TGTG·T····G·GCC·--·---------------------------------C·T·----------T·AC---------------------A·A··--------·C··-----CAG··T----··AAGCT··T-------C••••CT·T·A··GG·T·T·A
squirrel -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
pika ···-T··--G--····C-··A---CA·G·C----------CGACTA------TG·GAC····GA··--AGCCAGCTGCAATG··T···C-------------C·T·CTCCCAGC--T··C---------------------T···A--------··GC-----CA··CC----AG·AGC···-------------------··C······G
rabbit ···-T·T--G--··C·C-···---···G·CGCGAGCAGATTGTGTA------TG·T····A·GA··--AGCTGGCTGTGGTT······C·------------C·T·CTCCAGGC--T··C---------------------T···A--------··AC-----AG·AC·----·G·AGC···-------------------······G·T·
alpaca -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
cow ···-T·G··G--CTC··-···---·A·G··ATGGACAGATTGTCTCCA--TGTG···G··A·G···--ATGCCGGTTCTGCT····G·C·------------C·G·----------·C··-----------CAGCCTCCCC····A--------G·--GCA-GGGT··G----·G·AGC·CA··C--··•••••••····-········--
dolphin ···-T··ACG--·G·A·-···---·A·G··ACGGACAGATTGTCTCTG--TGTG·T····A·GCA·--AAGCTGGCTCAGCT···TG·C·------------C···----------·C··-----------CAGCTTCCTT···A·--------G·------GAGGA·G----·G·AGC·····C--·C•••••••····-··········
cat ···-T·G··G--·G·A·-···---·A·G··AAGAACAGATTGTCTCTATGTGTG·T····A·GCA·--AAACCAGCTTCACTTG····TC------------C···----------·C··-----------CGGCTTCCTT···AA--------G···GCA-GGAG·AG----AG·AGC·····CTT··T•T•••-····-··C·······
dog ·T·-T····G--···A·-···---·A·G··AGGAAAAGATTGACACAA--TGTG·T····A·GCA·--AAACCAGCATCACTT·A···TC------------C···----------·C··-----------CAGCTTCCTT···AA--------G···GCA-GGAG·AG----AG·AGC·····C--··T•T•••-····-··········
horse ···-T····G--···A·-··A---·A·G··ACGAACAGATTGTCTCTA--TGTGCT····A·GCA·--GAAC----------TG····C·------------C···----------····-----------CAGCTTCCTT-------------G···GGA-GGAG·AG----·G·AGCGG···C--··•••••••····-·A········
megabat ···-T·G··GT-CT·A·-···---·A·G··ATGAACAGATTGTCTCTA--TGTG·G····A·GCA·--AAACTGGCATTGCT·G····C·------------C···----------·C··-----------CAGCTCCCTT···AA--------G···GGC-AGAG·AG----·G·AGC··A··C--·G•••••C•·G··-··C·······
microbat ···-T····G--C··A·-···---·A·G··GTGAACAGATTGTCTCTA--TGTG·T····A·GCAA--GAACTGGCATCTCC···-··CG------------C···----------·CG·-----------CAGCTTCC-T···AA--------G···GGT-GGAG·AG----·G·AGTG····C--··•••••C•····-··------T·
hedgehog ···-T·T·G·--··AA·-TG·---·A·A··AGAAACAGGTGG--------TCTG·GTC··G·G··T--GAACAACCACTCTT··A·····------------C···----------·C··-----------TGGCATCCCT···AA--------G···----GGAGAAG----·G··GC·CA··C--GAC••••CT·CAA-A····---··
shrew -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
armadillo ···-T·G·GG--···C·-···---·A·G··CTAA----------------------······GCAT--·-------------······C·------------CA··----------·C··-----------CAGGTTCCTT···AA--------····GGAGGAGGA·G----·A·AGC·····C--··•••••••····-·········-
sloth -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
elephant ···-T····G--···C·-T··---·A·T·GACAAATGGATTGTCTGTG--TGTGAT····A·GCA---C-------------G·A···C·------------CAG·----------·CT·-------------GGTATCCTT···A--------····CGAAAAGGA·G----·A·AGC··A··C--··•••••••····-·C········
rockHyrax ···GTG··GG--···C·-TG·---·A·G··GCAAATAGAC------CA--TGTG·T···AA·G··---·-------------G·A···C·------------CAG·----------·AT·-------------GGTTGCTGT···A--------···GGGAAGAGGA·G----·A·AGC·····C--··•••••••-···-·C·······C
tenrec ----TGT·G-------·-···---·A·GTGGCA-------------CC--CTTGA··-----------C-------------TCAGT·CC------------CAG·----------·C·C-------------GGCTTTCT·····--------····GGGTGAGG·AT----·-------------------•••-GAA-·T·G······
opossum ·TG-·T·-----·G···C··A---·A·T·GTCATTCAAAT------------------·TA·GCA·--·CCCCTTCTTCCTC·CA··TC·TGA---------····----------A·T·TCTGAGGTCCATAGCTATCCA···AA--------GAG·GCCAAAAG··G----AA·A·C··T···--··•C••A•T····-·TA··T·T·-
platypus ·TG------G--·G·AG-T··---·GG·T·--------------------CTGG······AGG·AG--G-------------TG·TT·C·------------CAG·----------TG·C----------------------------------····---------------------------------------CT·-A·CA·T··TG
chicken -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
zebraFinch -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
lizard -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
frog -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
fugu -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
tetraodon -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
medaka -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
stickleback -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
zebrafish -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
lamprey -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
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