Natural Language Processing

  • Joint multilingual learning for coreference resolution
    Andreea Bodnari
    MIT PhD Thesis
  • Probabilistically populated medical record templates- reducing clinical documentation time using patient cooperation.
    Tristan Neumann, Marzyeh Ghassemi, Andreea Bodnari, Rohit Joshi
    AMIA Annual Symposium, Washington, D.C., November 2013.
    3rd place winner of the AMIA 2013 Student Design Challenge: Reinventing Clinical Documentation
  • Multilingual named-entity recognition from parallel corpora
    Andreea Bodnari, Aurélie Névéol, Özlem Uzuner, Pierre Zweigenbaum, Peter Szolovits.
    In proceedings CLEF-2013, Valencia, Spain
  • A supervised named-entity extraction system for medical text
    Andreea Bodnari, Louise Deléger, Thomas Lavergne, Aurélie Névéol, Pierre Zweigenbaum.
    In proceedings CLEF-2013, Valencia, Spain
  • A supervised abbreviation resolution system for medical text
    Pierre Zweigenbaum, Louise Deléger, Thomas Lavergne, Aurélie Névéol, Andreea Bodnari.
    In proceedings CLEF-2013, Valencia, Spain
  • Evaluating the state of the art in coreference resolution for electronic medical records.
    Özlem Uzuner, Andreea Bodnari, Shuying Shen, Tyler Forbush, John Pestian, Brett R South
    JAMIA 2012 doi:10.1136/amiajnl-2011-000784
  • A medication extraction framework for electronic health records
    Andreea Bodnari
    MIT MS Thesis, 2012
    Download MS Thesis
  • MCORES: a system for noun phrase coreference resolution for clinical records
    Andreea Bodnari, Özlem Uzuner, Peter Szolovits
    JAMIA 2012 doi:10.1136/amiajnl-2011-00059

Clinical Outcomes

  • Content and knowledge aggregation to reason about cases of fetal dysmorphology
    Jean Charlet, Xavier Aimé, Andreea Bodnari, Jean-Michel Daube, Louise Deléger, Ferdinand Dhombres, Egle Eensoo, Marie Gonzalès, Brigitte Grau, Cyril Grouin, Marie-Christine Jaulent, Thomas Lavergne, Anne-Laure Ligozat, Jérôme Mainka, Aurélie Névéol, Yves Paregrave;s, Mathieu Valette, Pierre Zweigenbaum
    Proceedings of the 2013 IMIA Francophone SIG. Copenhague, Danemark
  • Assessing Quality of Life in Pancreatic Cancer: A Shifting Landscape
    Jillian K Smith, Jessica P Simons, Elan R Witkowski, Andreea Bodnari, Mary Beth Curnen, Sing Chau Ng, Mary E Sullivan, Shauneen Valliere, Shimul A Shah, Jennifer F Tseng
    Society of the Alimentary Tract 52nd Annual Meeting, Digestive Disease Week, Chicago, IL, May 2011
  • Tumor registry versus physician medical record review: a direct comparison of patients with pancreatic neuroendocrine tumors
    Elisabet E Manasanch, Jillian K Smith, Andreea Bodnari, Jeannine McKinney, Catherine Gray, Theodore P McDade, Jennifer F Tseng
    Journal of Oncology Practice 2011 Mar;7(2):111-6.
  • A risk score for pancreatectomy to aid surgical decision-making
    James Carroll, Joshua S Hill, Sing-Chau Ng, Andreea Bodnari, Jillian K Smith, Theodore P McDade, Z Zhou, Shimul A Shah, Jennifer F Tseng
    Accepted for oral presentation at the American College of Surgeons 96th Annual Clinical Congress, Washington, DC, October 2010.
  • Computationally enhanced medical decision support for pancreatic cancer
    Andreea Bodnari, Towa Matsumura, Carolina Ruiz, Mellisa M Murphy, Jessica P Simons, Giles F Whalen, Jennifer F Tseng
    Poster Presentation at the 2009 AMIA Spring Congress, May 2009.
  • Tumor registry versus physician medical record review: a head-to-head comparison of malignant pancreatic neuroendocrine tumor (mPNET) cases
    Elisabet E Manasanch, Theodore P McDade, Andreea Bodnari, Jeannine McKinney, Mary E Sullivan, Giles F Whalen, Bilal Piperdi, Alan G Rosmarin, Jennifer F Tseng
    Poster presentation at the American Society of Clinical Oncology Annual Meeting, Orlando, FL, May 2009.
  • In-hospital mortality for liver resection for metastatic disease: a simple risk score.
    Jessica P Simons, Sing Chau Ng, Joshua S Hill, Shimul A Shah, Andreea Bodnari, Zheng Zhou, Jennifer F Tseng
    Journal of Surgical Research 2009 Sept; 156(1), 21-25.
  • Predicting major complications after laparoscopic cholecystectomy: A simple sisk score.
    Melissa M Murphy, Shimul A Shah, Jessica P Simons, Nicholas G Csikesz, Theodore P McDade, Andreea Bodnari, Sing-Chau Ng, Zheng Zhou, Jennifer F Tseng
    Journal of Gastrointestional Surgery; 2009 Nov:13(11):1929-1936