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'Local Rules' Theory Applied to Polyomavirus Polymorphic Capsid Assemblies
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Russell S. Schwartz, Robert L. Garcea, and Bonnie Berger
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The papovaviruses are nonenveloped dsDNA viruses whose capsids are
characterized by a non-quasi-equivalent bonding pattern in which 72
pentameric capsomeres occupy positions having either five or six
neighboring capsomeres. The local rules theory of Berger et al. (1994,
Proc. Natl. Acad. Sci. USA, 91, 7732-7736), previously developed to
explain aspects of icosahedral capsid assembly, has been applied to
the papovavirus geometry. Local rules describe capsid symmetry
patterns in terms of the local interactions of assembly units, such as
coat proteins or capsomeres. Polymorphic assemblies, including T = 1
icosahedral, dodecahedral, spiral, and tubular structures of the
polyomavirus VP1 protein, can be induced by specific mutations or
changes in the solvent conditions during in vitro assembly of the
recombinant coat protein. Local rules models were developed to model
the wild-type capsid and several polymorphic assemblies. Some
assemblies corresponded to structures modeled by small deviations from
wild-type local rules. We conclude that aspects of polyomavirus
assembly are consistent with local rules models, although they do not
explain all polymorphisms. These results may provide insights into the
nature of papovavirus assembly, constraints on assembly pathways, and
strategies for disrupting assembly.
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http://www.idealibrary.com/links/doi/10.1006/viro.1999.0180/pdf
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