|
|
|
A Local Rule Based Theory of Virus Shell Assembly
|
|
Bonnie Berger, Peter W. Shor, Lisa Tucker-Kellogg, and Jonathan King
|
|
|
|
A local rule-based theory is developed which shows that the
self-assembly of icosahedral virus shells may depend on only the
lower-level interactions of a protein subunit with its
neighbors-i.e., on local rules rather than on larger structural
building blocks. The local rule theory provides a framework for
understanding the assembly of icosahedral viruses. These include
both viruses that fall in the quasiequivalence theory of Caspar
and Klug and the polyoma virus structure, which violates
quasi-equivalence and has puzzled researchers since it was first
observed. Local rules are essentially templates for energetically
favorable arrangements. The tolerance margins for these rules are
investigated through computer simulations. When these tolerance
margins are exceeded in a particular way, the result is a
"spiraling" malformation that has been observed in nature.
|
|
http://www.pnas.org/cgi/reprint/91/16/7732.pdf
|
|
|
|