microRNAviewer-all
microRNAviewer

microRNAviewer presents a global view of homologous miRNA genes in many species. microRNAviewer exhibits a comprehensive set of miRNA genes both from miRbase and candidate homologs identified using miRNAminer. microRNAviewer table shows conservation of miRNA genes, grouped by name, in addition to other information (see Help).

The table shows conservation of miRNA genes, grouped by name. Click on group name to see conservation for each miRNA and genomic location. Point cursor on miRNA to see summary of origin information. Symbols • indicate miRNAs present in miRbase (other miRNAs are newly discovered by miRNAminer.) Grey box indicates that the miRNA was not identified in this genome, under stringent parameters. Zoom out to see the full table by pressing Ctr- (or Mac-) a few times. Initial loading of table might take a few moments (for best performance use Firefox or Chrome).

If you use microRNAviewer, please cite (note that the name of the tool has changed):
Adam Kiezun, Shay Artzi, Shira Modai, Naama Volk, Ofer Isakov and Noam Shomron, miRviewer: A multispecies microRNA homologous viewer In BMC Research Notes 2012, 5:92

Questions:mirnaminer@gmail.com
microRNAviewer is developed by Adam Kiezun (Broad Institute of Harvard and MIT) , Shay Artzi (IBM) , and Noam Shomron (Tel Aviv) .
Last update Feb 28, 2012

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conservation 1.0 0.97 0.94 0.91 0.88 0.85 0.82 0.79 0.76 0.73 0.7 0.67 0.64 0.61 0.58 0.55 0.52 0.49 0.46 0.43 0.4

miRNA hsa ptr ggo ppy mml cja tsy mmr oga tbe cpo dor mmu rno str opr ocu bta ttr vpa ssc cfa fca eca mlu pva eeu sar cho ete laf pca meu mdo oan gga mga tgu aca xtr dre gac ola tru tni cin csa dme cel
Known/New 792/48 426/15 68/508 442/163 350/132 0/381 0/194 0/248 0/250 0/205 0/272 0/224 471/40 324/57 0/228 0/210 0/259 502/47 0/286 0/182 158/111 231/90 0/223 251/28 0/221 0/254 0/179 0/154 0/149 0/195 0/284 0/223 0/134 122/37 199/6 409/23 0/197 139/44 0/120 104/30 137/21 0/110 1/110 0/117 79/34 262/1 19/5 158/0 165/0
let-7 (28)
mir-34 (10)
mir-133 (10)
mir-92 (10)
mir-216 (8)
mir-7 (9)
mir-124 (12)
mir-101 (7)
mir-135 (11)
mir-15 (6)
mir-181 (9)
mir-196 (10)
mir-29 (13)
mir-125 (11)
mir-1 (9)
mir-19 (6)
mir-365 (5)
mir-199 (9)
mir-10 (7)
mir-190 (3)
mir-9 (13)
mir-103 (6)
mir-106 (3)
mir-107 (3)
mir-128 (5)
mir-146 (8)
mir-16 (6)
mir-20 (5)
mir-27 (8)
mir-30 (9)
mir-217 (3)
mir-100 (3)
mir-79 (1)
mir-130 (8)
mir-148 (3)
mir-17 (6)
mir-24 (7)
mir-2985 (3)
mir-193 (6)
mir-219 (4)
mir-122 (5)
mir-138 (5)
mir-18 (4)
mir-218 (6)
mir-222 (5)
mir-301 (8)
mir-99 (7)
mir-153 (6)
mir-183 (1)
mir-31 (3)
mir-33 (4)
mir-142 (5)
mir-144 (1)
mir-194 (5)
mir-205 (3)
mir-214 (1)
mir-2145 (2)
mir-221 (1)
mir-223 (1)
mir-23 (7)
mir-3074 (3)
mir-126 (2)
mir-200 (4)
mir-206 (3)
mir-21 (3)
mir-451 (2)
mir-129 (5)
mir-140 (1)
mir-22 (3)
mir-3591 (1)
mir-3618 (1)
mir-455 (2)
mir-499 (1)
mir-551 (3)
mir-145 (1)
mir-204 (9)
mir-3604 (2)
mir-98 (1)
mir-155 (1)
mir-449 (5)
mir-3582 (1)
mir-187 (1)
mir-3120 (1)
mir-3570 (1)
mir-184 (2)
mir-32 (1)
mir-490 (3)
mir-208 (3)
mir-302 (9)
mir-139 (1)
mir-1306 (1)
mir-429 (2)
mir-96 (1)
mir-3567 (1)
mir-3600 (1)
mir-367 (1)
mir-1291 (3)
mir-363 (1)
mir-147 (5)
mir-25 (3)
mir-141 (3)
mir-137 (6)
mir-186 (1)
mir-1248 (3)
mir-383 (1)
mir-143 (3)
mir-182 (1)
mir-375 (3)
mir-592 (1)
mir-876 (1)
mir-1251 (1)
mir-28 (1)
mir-1905 (4)
mir-3603 (1)
mir-2957 (1)
mir-875 (1)
mir-215 (1)
mir-3590 (1)
mir-489 (1)
mir-739 (1)
mir-93 (3)
mir-132 (3)
mir-500 (4)
mir-376 (7)
mir-381 (1)
mir-411 (1)
mir-191 (1)
mir-150 (1)
mir-3588 (1)
mir-3548 (1)
mir-338 (5)
mir-501 (1)
mir-502 (4)
mir-362 (1)
mir-544 (6)
mir-761 (1)
mir-802 (1)
mir-105 (5)
mir-299 (1)
mir-324 (1)
mir-374 (4)
mir-496 (1)
mir-874 (1)
mir-1282 (3)
mir-323 (2)
mir-329 (5)
mir-331 (1)
mir-487 (2)
mir-582 (1)
mir-652 (1)
mir-671 (1)
mir-320 (12)
mir-152 (1)
mir-192 (1)
mir-26 (9)
mir-491 (1)
mir-423 (2)
mir-328 (3)
mir-335 (1)
mir-346 (1)
mir-379 (1)
mir-488 (1)
mir-495 (1)
mir-505 (1)
mir-568 (1)
mir-758 (1)
mir-151 (1)
mir-340 (1)
mir-497 (1)
mir-759 (1)
mir-1343 (1)
mir-3529 (1)
mir-454 (3)
mir-202 (3)
mir-203 (3)
mir-127 (1)
mir-452 (1)
mir-504 (1)
mir-1249 (1)
mir-188 (1)
mir-224 (1)
mir-3059 (1)
mir-377 (1)
mir-450 (7)
mir-764 (1)
mir-2904 (3)
mir-425 (1)
mir-212 (1)
mir-210 (1)
mir-1296 (1)
mir-1264 (1)
mir-1912 (1)
mir-3085 (1)
mir-369 (1)
mir-382 (1)
mir-410 (1)
mir-424 (1)
mir-486 (1)
mir-532 (1)
mir-543 (1)
mir-628 (2)
mir-599 (1)
mir-2113 (1)
mir-3563 (1)
mir-136 (1)
mir-185 (1)
mir-342 (1)
mir-378 (5)
mir-380 (1)
mir-412 (1)
mir-432 (1)
mir-542 (1)
mir-660 (1)
mir-195 (1)
mir-409 (1)
mir-421 (1)
mir-2414 (1)
mir-326 (1)
mir-339 (2)
mir-345 (1)
mir-3546 (1)
mir-494 (1)
mir-503 (1)
mir-541 (1)
mir-615 (1)
mir-670 (1)
mir-3065 (1)
mir-370 (1)
mir-1911 (1)
mir-330 (1)
mir-708 (1)
mir-322 (1)
mir-296 (1)
mir-3071 (1)
mir-371 (1)
mir-485 (1)
mir-885 (1)
mir-653 (1)
mir-154 (1)
mir-3107 (1)
mir-3581 (1)
mir-384 (1)
mir-1260 (2)
mir-3557 (1)
mir-3653 (1)
mir-655 (1)
mir-2053 (1)
mir-3660 (1)
mir-3554 (1)
mir-1893 (1)
mir-3545 (1)
mir-493 (3)
mir-539 (1)
mir-665 (1)
mir-1193 (1)
mir-1956 (1)
mir-3578 (1)
mir-484 (1)
mir-632 (1)
mir-711 (1)
mir-3610 (1)
mir-3556 (2)